Job Description P0A6S7 Confidence 100.00% Date Thu Jan 5 11:03:50 GMT 2012 Rank 20 Aligned Residues 295 % Identity 14% Template c1pgqA_ PDB info PDB header:oxidoreductase (choh(d)-nadp+(a)) Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism Resolution 3.17 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		N	A	S	M	T	V	I	G	A	G	S	Y	G	T	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	.	.	.	N	I	L	V
Query Conservation																																																																											.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	D	I	A	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	M	N	D	H	G	F	V	V	C	A	F	N	R	T	V	S	K	V	D	D	F	L	A	N	E	A	.	.	.	.	.	.	.	.	.	K	G	T	K	V	L	G	A	H	S	L	E	E	M	V	S	K	L	K	K	P	R	R	I	I	L
Template Known Secondary structure			B	S							S													T	T								S	S	T									T	T	T	.	.	.	.	.	.	.	.	.	T	T	S	S					S	S								B		S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		V	V	P	S	.	H	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E	L	A	A	G	L	P	T	A	I	S	L	A	S	T	D
Query Conservation						.
Alig confidence						.																										.																																			.	.	.	.	.		.
Template Conservation																																.																																			.	.	.	.	.		.
Template Sequence		L	V	K	A	G	Q	A	V	D	N	F	I	E	K	L	V	P	L	L	D	I	G	D	I	I	I	D	G	G	N	.	S	E	Y	R	D	T	M	R	R	C	R	D	L	K	D	K	G	I	L	F	V	G	S	G	V	S	G	G	E	D	G	A	R	Y	.	.	.	.	.	G	.	P	S	L	M	P	G	G	N
Template Known Secondary structure				S		S											T	T	T			T	T							S		.																T	T										S								.	.	.	.	.		.
Template Predicted Secondary structure																																.																																			.	.	.	.	.		.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.						.		.	.	140	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		Q	T	F	A	D	D	L	Q	Q	L	L	H	C	G	K	S	F	R	V	Y	S	N	P	D	F	I	G	V	Q	L	G	G	A	V	K	N	V	I	A	I	G	A	G	M	S	D	G	I	G	F	G	A	N	A	R	T	A	L	I	T	R	G	L	A	E	M	S	R	L	G	A	A	.	L	G	A	D	P	A	T
Query Conservation																																																																										.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																																														.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	E	A	W	P	H	I	K	A	I	F	Q	G	I	A	A	.	.	.	.	.	.	.	.	.	.	.	K	V	G	T	G	E	P	C	C	D	W	V	G	D	D	G	A	G	H	F	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	H	L	M	K	D	V	L	G	L	G	H	K	E
Template Known Secondary structure		T	T	T												S		.	.	.	.	.	.	.	.	.	.	.			T	T	T			S							T	T																														T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.		.	.
Predicted Secondary structure									.	.	.																																																												.								.
Query SS confidence									.	.	.																																																												.								.
Query Sequence		F	M	G	M	A	G	L	.	.	.	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	M	M	L	G	Q	G	M	D	V	Q	S	A	Q	E	K	I	G	Q	V	V	E	G	Y	R	N	T	K	E	V	R	E	L	A	H	R	F	G	V	E	M	P	.	I	T	E	E	I	Y	Q	.	V	L
Query Conservation									.	.	.																																																												.								.
Alig confidence									.	.	.																					.																														.	.	.	.						.								.
Template Conservation																																.																														.	.	.	.
Template Sequence		M	A	K	A	F	E	E	W	N	K	T	E	L	D	S	F	L	I	E	I	T	A	S	I	L	K	F	Q	D	A	.	D	G	K	H	L	L	P	K	I	R	D	S	A	G	Q	K	G	T	G	K	W	T	A	I	S	A	L	E	Y	.	.	.	.	G	V	P	V	T	L	I	G	E	A	V	F	A	R	C	L
Template Known Secondary structure										T	T	T	T	T		B													B		T	.	T	S	S	B	S	G	G	G	S								S													.	.	.	.	T
Template Predicted Secondary structure																																.																														.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	C	G	K	N	A	R	E	A	A	L	T	L	L	G	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	L	K	D	E	R	I	Q	A	S	K	K	L	K	G	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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