Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S7
Confidence98.86%DateThu Jan 5 11:03:50 GMT 2012
Rank186Aligned Residues102
% Identity16%Templatec1ldbA_
PDB info PDB header:oxidoreductase(choh(d)-nad(a))Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20......... 30.........40.........50.........60.........70.........
Predicted Secondary structure 










..






















Query SS confidence 



























. .

















































Query Sequence  NQRNASMTVIGAGSYGTALAITLARNGH. . EVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNI
Query Conservation    
   
 


 
  
   
  
   
 .. 
    
           
                      
     
 
Alig confidence 



























..
















......


























Template Conservation       

 




 

   
  
       

 
 
       
   ......

          
       
  



Template Sequence  NNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAM. . . . . . DFNHGKVFAPKPVDIWDYDDCRDADLV
Template Known Secondary structure  S

SS

STTT

S
SS......GGGTT



GGG
SS
S
Template Predicted Secondary structure 















......










Template SS confidence 















































































   17..20.........30.........40.........50.........60... ......70.........80.........90
 
   80.... .....90.........100.........110
Predicted Secondary structure 

........





Query SS confidence 




. . . . . . . .

























Query Sequence  LVVVP. . . . . . . . SHVFGEVLRQIKPLMRPDARLVWATK
Query Conservation 

 
 ........      
   
         

   
Alig confidence 




........














.









Template Conservation 

 

       
  
   
   
    .
    

 

Template Sequence  VICAGANDLVDKNIAIFRSIVESVMASG. FQGLFLVATN
Template Known Secondary structure 






TT.

S

S
Template Predicted Secondary structure 




.




Template SS confidence 






































   93......100.........110.........120 .........130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions