Job Description P0A6S7 Confidence 97.78% Date Thu Jan 5 11:03:50 GMT 2012 Rank 388 Aligned Residues 138 % Identity 17% Template c1j6uA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate-alanine ligase murc; PDBTitle: crystal structure of udp-n-acetylmuramate-alanine ligase2 murc (tm0231) from thermotoga maritima at 2.3 a resolution Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																.																					.
Query SS confidence																.																					.
Query Sequence		N	A	S	M	T	V	I	G	A	G	S	Y	G	T	.	A	L	A	I	T	L	A	R	N	G	H	E	V	V	L	W	G	H	D	P	.	E	H	I	A	T	L	E	R	D	R	C	N	A	A	F	L	P	D	V	P	F	P	D	T	L	H	L	E	S	D	L	A	T	A	L	A	A	S	R	N	I	L	V	V
Query Conservation																.																					.
Alig confidence																.																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	X	K	I	H	F	V	G	I	G	G	I	G	X	S	A	V	A	L	H	E	F	S	N	G	N	D	V	Y	G	S	N	I	E	E	T	E	R	T	A	Y	L	R	K	L	G	I	P	I	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	S	A	D	N	W	Y	D	P	D	L	V	I	K	T
Template Known Secondary structure									T	T	T	S													T	T								S	S											T	T					S	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T	S					S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50														.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
																			83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	S	H	V	F	G	E	V	L	R	Q	I	K	P	L	M	R	P	D	A	R	L	V	W	A	T	K	G	L	E	A	E	T	G	R	L	L	Q	D	V	A	R	E	A	L	G	D	Q	I	P	L	A	V	I	S	G	P	T	F	A	K	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation																																																			.
Template Sequence		P	A	V	R	D	D	N	P	E	I	V	R	A	R	X	E	R	V	P	I	E	N	R	L	H	Y	F	R	D	T	L	K	R	E	K	K	E	E	F	A	V	T	G	T	D	G	K	T	T	.	T	T	A	X	V	A	H	V	L	K	H	L	R	K	S	P	T	V	F	L	G	G	I	X	D	S	L	E	H	G
Template Known Secondary structure		T	T			T	T										T	T																											S	S	S				.												T	T								S	S			T	T	S	T	T	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	G	L	P	T	A	I	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Y	E	K	G	N	G	P	V	V	Y
Template Known Secondary structure		S					S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions