Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6S7
Confidence98.81%DateThu Jan 5 11:03:50 GMT 2012
Rank195Aligned Residues109
% Identity17%Templatec1j4aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  RNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATLERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVV
Query Conservation 
   
 


 
  
   
  
   
  
    
           
                      
     
 


 
Alig confidence 



































..









...............
















Template Conservation   

 




 
 

  

  
  

  
   
    ..          ...............  
 


  



    
Template Sequence  RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRN. . PELEKKGYYV. . . . . . . . . . . . . . . DSLDDLYKQADVISLHV
Template Known Secondary structure  GGS

STT

SS

..TT
B
...............S

S
S
Template Predicted Secondary structure 












..



...............




Template SS confidence 















































































   145....150.........160.........170.........180 .........190 .........200.......
 
   84 .....90.. .......100.........110.........120.........
Predicted Secondary structure 
..











Query SS confidence 
.







.




































Query Sequence  P. SHVFGEVL. RQIKPLMRPDARLVWATKGLEAETGRLLQDVAREALG
Query Conservation   .      
 .  
         

   


                 
Alig confidence 
.







.




































Template Conservation 


  
  

    
  

 

 


  

 



 

  

  
 
 
Template Sequence  PDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIF
Template Known Secondary structure 


GGGTT
BSS
TT
S
GGGB
TS
Template Predicted Secondary structure 
























Template SS confidence 















































   208.210.........220.........230.........240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions