Job Description C0Z3X9 Confidence 74.45% Date Thu Jan 5 10:55:44 GMT 2012 Rank 34 Aligned Residues 78 % Identity 12% Template c2gv9B_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase; PDBTitle: crystal structure of the herpes simplex virus type 1 dna polymerase Resolution 2.68 Å

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		9	10	.	.	.	.	.	.	.				.	.						20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.			.	.	.	.	.						.	.
Query SS confidence											.	.	.			.	.	.	.	.						.	.
Query Sequence		T	F	L	F	H	D	Y	E	T	.	.	.	F	G	.	.	.	.	.	T	H	P	A	L	.	.	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E
Query Conservation											.	.	.			.	.	.	.	.						.	.
Alig confidence											.	.	.			.	.	.	.	.						.	.																																																					.
Template Conservation																																																																																.
Template Sequence		K	L	M	C	F	D	I	E	C	K	A	G	G	E	D	E	L	A	F	P	V	A	G	H	P	E	D	L	V	I	Q	I	S	C	L	L	Y	D	L	S	T	T	A	L	E	H	V	L	L	F	S	L	G	S	C	D	L	P	E	S	H	L	N	E	L	A	A	R	G	L	P	T	P	V	V	L	E	F	.	D
Template Known Secondary structure														S	S		T	T	S				T	T	S	T	T	S												T	T	T												S															T	T										.	S
Template Predicted Secondary structure																																																																																.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440		.
		79	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	A	F	A	A	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	F	E	M	L	L	A	F
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions