 |
Job Description | C0Z3X9 | Confidence | 45.38% | Date | Thu Jan 5 10:55:44 GMT 2012 |
Rank | 41 | Aligned Residues | 25 |
% Identity | 20% | Template | c1d5aA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:protein (dna polymerase); |
PDBTitle: crystal structure of an archaebacterial dna polymerase2 d.tok. deposition of second native structure at 2.43 angstrom
|
Resolution | 2.40 Å |
|
  |   |
9 | 10 | . | . | . | . | . | . | . | |
|
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | F | L | F | H | D | Y | E | T | . |
. |
. |
F | G | T | H | P | A | L | D | R | P | A | Q | F | A | A | I |
Query Conservation |   |
  |   |
|   |   |
|   |
|
| . | . | . |
|
|
|   |
|   |   |
|   |
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |
|
|   |   |
Template Sequence |   |
R | M | L | A | F | D | I | E | T | L | A | H | A | G | A | A | A | G | A | G | P | I | L | M | I | S | Y | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
|
| S |
|
| S | S |
| S | S |
| S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|