Job Description P26218 Confidence 90.54% Date Thu Jan 5 11:42:49 GMT 2012 Rank 7 Aligned Residues 300 % Identity 12% Template d1phoa_ SCOP info Transmembrane beta-barrels Porins Porin Resolution 3.00

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	E	I	G	F	S	Y	N	G	Y	Y	R	S	G	W	G	T	A	S	H	G	S	P	K	S	W	A	I	G	S	L	G	R	F	G	N	E	Y	S	G	W	F	D	L	Q	L	K	Q	R	V	Y	N	E	N	G	K	R	V	D	A	V	V	M	M	D	G	N	V	G	Q	Q	Y	S	T	G	W	F	G	D
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template Sequence		K	D	G	N	K	L	D	V	Y	G	K	V	K	A	M	H	Y	M	S	D	N	A	S	K	D	G	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	S	Y	I	R	F	G	F	K	G	E	T	Q	I	N	D	Q	L	T	G	Y	G	R	W	E	A	E	F	A	G	N	K	A	E	S	D	T	A	Q	.	.
Template Known Secondary structure			S	S	B																S	S	S	S				.	.	.	.	.	.	.	.	.	.	.	.																S	S	S													S	S	S		T	T					.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.																																									.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.													.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.														.	.	260	.	.	.	.	.
Predicted Secondary structure																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	G	G	E	N	Y	M	Q	F	S	D	M	Y	V	T	T	K	G	F	L	P	F	A	P	E	A	D	F	W	V	G	K	H	G	A	P	K	I	E	.	I	Q	M	L	D	W	K	T	Q	R	T	D	A	A	A	G	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	N	W	K	V	G	P
Query Conservation																																										.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.										.	.	.	.																					.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.										.	.	.	.
Template Sequence		.	.	.	.	.	.	.	Q	K	T	R	L	A	F	A	G	.	.	.	.	L	K	Y	K	D	L	G	S	F	D	Y	G	R	N	L	G	A	L	Y	D	V	E	A	W	T	D	M	F	P	E	F	G	G	D	S	S	A	Q	T	D	N	F	M	T	K	R	A	S	G	L	A	T	Y	R	N	T	D	F	F	G
Template Known Secondary structure		.	.	.	.	.	.	.										.	.	.	.				T	T	T											S	T					T	T	T			S	S	S			S		S	S			T	T	S	T	T	T	S												S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
									79	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	D	I	A	L	V	R	E	D	V	D	D	Y	D	R	S	L	Q	N	K	Q	Q	I	N	T	N	T	I	D	L	R	Y	K	D	I	P	L	W	D	K	A	T	L	M	V	S	G	R	Y	V	T	A	N	E	S	A	S	E	K	D	N	Q	D	N	N	G	Y	Y	D	W	K	D	T	W	M	F	G	T
Query Conservation
Alig confidence																																									.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		V	I	D	G	L	N	L	T	L	Q	Y	Q	G	K	N	E	N	R	D	V	K	K	Q	N	G	D	G	F	G	T	S	L	T	Y	D	F	G	G	S	.	.	.	.	.	.	D	F	A	I	S	G	A	Y	T	N	S	D	R	T	N	E	Q	N	L	Q	S	R	G	T	G	K	R	A	E	A	W	A	T	G	L
Template Known Secondary structure		T		T	T											B		S	S		S	T	T		B		S											T	T	T	.	.	.	.	.	.	T														G	G	G	T	T	S	S	S	S		S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	Q	K	F	D	K	G	G	F	N	E	F	S	F	L	V	A	N	N	S	I	A	S	N	F	G	R	Y	A	G	A	S	P	F	T	T	F	N	G	R	Y	Y	G	D	H	T	G	G	T	A	V	R	L	T	S	Q	G	E	A	Y	I	G	D	H	F	I	V	A	N	A	I	V	Y	S	F	G	N	D
Query Conservation
Alig confidence										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	D	A	N	N	I	Y	.	.	.	.	.	L	A	T	F	Y	S	E	T	R	K	M	T	P	I	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	A	N	K	T	Q	N	F	E	A	V	A	Q	Y	Q	F	D	F	G	L	R	P	S	L	G	Y	V	L	S	K	G	K	D
Template Known Secondary structure						T	T			.	.	.	.	.										S		S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		S														S	S	S														S
Template Predicted Secondary structure										.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.						.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	S	Y	E	T	G	A	H	S	D	F	E	S	I	R	A	V	V	R	P	A	Y	I	W	D	Q	Y	N	Q	T	G	V	E	L	G	Y	F	T	Q	Q	N	K	D	A	N	S	N	K	F	N
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	E	G	I	G	D	E	D	L	V	N	Y	I	D	V	G	A	T	Y	Y	F	N	K	N	M	S	A	F	V	D	Y	K	I	N	Q	L	D	S	D	N	K	L	N	I	N	N	D
Template Known Secondary structure		.	.	.	.	B	T	T	T	B																S	S	S	S														S	S		T	T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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