Job Description P26218 Confidence 31.18% Date Thu Jan 5 11:42:49 GMT 2012 Rank 73 Aligned Residues 123 % Identity 9% Template c2f1tB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:outer membrane protein w; PDBTitle: outer membrane protein ompw Resolution 3.00 Å

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		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	I	V	A	N	A	I	V	Y	S	F	G	N	D	I	Y	S	Y	E	T	G	A	H	S	D	F	E	S	I	R	A	V	V	R	P	A	Y	I	W	D	Q	Y	N	Q	T	G	V	E	L	G	Y	F	T	Q	Q	N	K	D	A	N	S	N	K	F	N	E	S	G	Y	K	T	T	L	F	H	T	F	K	V
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		E	F	F	M	R	A	G	S	A	T	V	R	P	T	E	.	.	.	.	.	G	G	G	F	S	V	T	N	N	T	Q	L	G	L	T	F	T	Y	M	A	T	D	N	I	G	V	E	L	L	A	A	T	P	F	R	H	K	I	G	T	R	A	T	G	D	I	A	T	V	H	H	L	P	P	T	L	M	A	Q	W
Template Known Secondary structure																	.	.	.	.	.																						T	T									S									T	T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		491	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.								.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																						.	.	.	.	.	.	.
Query SS confidence									.	.																						.	.	.	.	.	.	.
Query Sequence		N	T	S	M	L	T	S	.	.	R	P	E	I	R	F	Y	A	T	Y	I	K	A	L	E	N	E	L	D	G	F	.	.	.	.	.	.	.	T	F	E	D	N	K	D	D	Q	F	A	V	G	A	Q	A	E	I	W	W
Query Conservation									.	.																						.	.	.	.	.	.	.
Alig confidence									.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	G	D	A	S	S	K	F	R	P	Y	V	G	A	G	I	N	Y	T	T	F	F	D	N	G	F	N	D	H	G	K	E	A	G	L	S	D	L	S	L	K	D	S	W	G	A	A	G	Q	V	G	V	D	Y	L	I
Template Known Secondary structure				S		T	T		S																										T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions