Job Description P26218 Confidence 31.24% Date Thu Jan 5 11:42:49 GMT 2012 Rank 72 Aligned Residues 32 % Identity 25% Template c1ce0B_ PDB info PDB header:hiv-1 envelope protein Chain: B: PDB Molecule:protein (leucine zipper model h38-p1); PDBTitle: trimerization specificity in hiv-1 gp41: analysis with a2 gcn4 leucine zipper model Resolution 2.40 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	E	L	L	E	K	A	L	R	E	T	Q	S	E	L	K	K	Y	K	D	E	E	K	K	K	Y	T	P	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	I	K	Q	Q	E	D	K	L	E	E	T	L	S	K	I	Y	H	L	E	N	E	I	A	R	V	K	K	L	L	G
Template Known Secondary structure																																	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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