 |
Job Description | P0ACI6 | Confidence | 99.39% | Date | Wed Jan 25 15:20:23 GMT 2012 |
Rank | 23 | Aligned Residues | 77 |
% Identity | 19% | Template | d2cfxa2 |
SCOP info | Ferredoxin-like
| Dimeric alpha+beta barrel
| Lrp/AsnC-like transcriptional regulator C-terminal domain
|
Resolution | 2.4 |
|
 |
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | G | C | F | I | G | I | I | L | K | S | A | K | D | Y | P | S | A | L | A | K | L | E | S | L | D | E | V | T | E | A | Y | Y | T | T | G | H | Y | S | I | F | I | K | V | M | C | R | S | I | D | A | L | Q | H | V | L | I | N | K | I | Q | T | I | D | E | I | Q | S | T | E | T | L | I | V | L | Q | N | P | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|
|
|   |   |
|   |
|   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |
|   |
|   |
|   |   |   | . |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |
|
|
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   | . | . | . | . |
|   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|   |   |
|   |
Template Sequence |   |
P | V | S | C | I | V | E | A | T | V | K | N | A | . |
D | Y | E | R | F | K | S | Y | I | Q | T | L | P | N | I | E | F | C | Y | R | I | A | G | A | A | C | Y | M | L | K | I | N | A | E | S | L | E | A | V | E | D | F | . |
. |
. |
. |
I | N | K | T | S | P | Y | A | Q | T | V | T | H | V | I | F | S | E | I | D |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | G | G | G | . |
|  |  |  |  |  |  |  |  |  | T |
| T | T |  |  |  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  | T | T | T |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | |
. | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
|
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
  |   |
147 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
M | R |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
|   |
Template Sequence |   |
T | K |
Template Known Secondary structure |   |
|
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
139 | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|