Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI6
Confidence93.43%DateWed Jan 25 15:20:23 GMT 2012
Rank251Aligned Residues41
% Identity20%Templated1ku7a_
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10...... ...20.........30.........40.....
Predicted Secondary structure 


...







Query SS confidence 











. . .




























Query Sequence  LIDNLDRGILEA. . . LMGNARTAYAELAKQFGVSPGTIHVRVEK
Query Conservation   

  
  

  ...
  
 
 
   

   
 
  

  

  
Alig confidence 











...




























Template Conservation   
  


 

  



      
  


  



   

    
Template Sequence  KLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENK
Template Known Secondary structure  SS
TTTTS



TS
Template Predicted Secondary structure 












Template SS confidence 











































   375....380.........390.........400.........410........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions