Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI6
Confidence90.76%DateWed Jan 25 15:20:23 GMT 2012
Rank296Aligned Residues48
% Identity10%Templatec3cuqA_
PDB info PDB header:protein transportChain: A: PDB Molecule:vacuolar-sorting protein snf8; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex
Resolution2.61 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50..
Predicted Secondary structure 













Query SS confidence 















































Query Sequence  LIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGII
Query Conservation   

  
  

  
  
 
 
   

   
 
  

  

  
   
 
Alig confidence 















































Template Conservation 

  
   

 


  
 

   
   



  

   
      


Template Sequence  ELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLA
Template Known Secondary structure 


TTTS
T

TS
Template Predicted Secondary structure 














Template SS confidence 















































   175....180.........190.........200.........210.........220..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions