Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACI6
Confidence97.32%DateWed Jan 25 15:20:23 GMT 2012
Rank69Aligned Residues49
% Identity20%Templatec2kkoB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:possible transcriptional regulatory protein PDBTitle: solution nmr structure of the homodimeric winged helix-turn-2 helix dna-binding domain (fragment 1-100) mb0332 from3 mycobacterium bovis, a possible arsr-family transcriptional4 regulator. northeast structural genomics consortium target5 mbr242e.
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50......
Predicted Secondary structure 











Query SS confidence 

















































Query Sequence  DNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGAR
Query Conservation 
  
  

  
  
 
 
   

   
 
  

  

  
   
 
    
Alig confidence 










.





































Template Conservation     

 

  
.        


  
 

   

 

  
  



   
Template Sequence  NGRRLQILDLL. AQGERAVEAIATATGMNLTTASANLQALKSGGLVEARR
Template Known Secondary structure 
.TT

T

TS
Template Predicted Secondary structure 
.










Template SS confidence 

















































   24.....30.... .....40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions