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Job DescriptionP0ACI6
Confidence100.00%DateWed Jan 25 15:20:23 GMT 2012
Rank5Aligned Residues146
% Identity29%Templatec2e1cA_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:putative hth-type transcriptional regulator ph1519; PDBTitle: structure of putative hth-type transcriptional regulator ph1519/dna2 complex
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  LIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVEKMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPS
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Template Sequence  PLDEIDKKIIKILQNDGKAPLREISKITGLAESTIHERIRKLRESGVIKKFTAIIDPEALGYSMLAFILVKV. KAGKYSE
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   24.....30.........40.........50.........60.........70.........80.........90..... ....100..
 
   85....90.........100.........110.........120.........130.........140.........150..
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Query Sequence  ALAKLESLDEVTEAYYTTGHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQNPIMRTIKP
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Template Sequence  VASNLAKYPEIVEVYETTGDYDMVVKIRTKNSEELNNFL. DLIGSIPGVEGTHTMIVLKTHKETTELP
Template Known Secondary structure  TSTT
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   103......110.........120.........130.........140. ........150.........160.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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