Job Description P0ACI6 Confidence 87.59% Date Wed Jan 25 15:20:23 GMT 2012 Rank 326 Aligned Residues 65 % Identity 11% Template c1u5tB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:defective in vacuolar protein sorting; vps36p; PDBTitle: structure of the escrt-ii endosomal trafficking complex Resolution 3.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		L	I	D	N	L	D	R	G	I	L	E	A	L	M	G	N	A	.	.	.	.	.	.	.	R	T	A	Y	A	E	L	A	K	Q	F	G	V	S	P	G	T	I	H	V	R	V	E	K	M	K	Q	A	G	I	I	T	G	A	R	I	D	V	S	P	K	Q	L	G	Y	D	V	G	C	F	I
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																																.	.	.
Template Conservation																																																									.	.	.
Template Sequence		K	F	D	V	V	K	E	K	L	V	D	L	I	G	D	N	P	G	S	D	L	L	R	L	T	Q	I	L	S	S	N	N	S	K	S	N	W	T	L	G	I	L	M	E	V	L	Q	N	C	V	D	E	G	D	L	.	.	.	L	I	D	K	Q	L	S	G	I	Y	Y	Y	K	N	S	Y	W
Template Known Secondary structure			S														S		S	B											T	S		T	T																			T	S		.	.	.						S	S									S	S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.				.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions