Job Description Q47154 Confidence 99.94% Date Thu Jan 5 12:36:29 GMT 2012 Rank 9 Aligned Residues 111 % Identity 21% Template c3td4D_ PDB info PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate Resolution 1.79 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	V	L	I	K	D	D	Q	N	R	N	M	F	E	R	G	S	A	K	I	M	P	F	F	K	T	L	L	V	E	L	A	P	V	F	D	S	L	D	N	.	K	I	I	I	T	G	H	T	D	A	M	A	Y	K	N	N	I	Y	N	N	W	N	L	S	G	D	R	A	L	S	A	R	R	V	L	E	E	A	G
Query Conservation																																										.
Alig confidence									.	.	.																															.												.	.	.
Template Conservation									.	.	.																																											.	.	.
Template Sequence		D	L	N	M	E	L	R	.	.	.	V	F	F	D	T	N	K	S	N	I	K	D	Q	Y	K	P	E	I	A	K	V	A	E	K	L	S	E	Y	P	N	A	T	A	R	I	E	G	H	T	D	N	T	.	.	.	G	P	R	K	L	N	E	R	L	S	L	A	R	A	N	S	V	K	S	A	L	V	N	E	Y
Template Known Secondary structure									.	.	.					T	T						G	G	G														S	T	T											S		.	.	.	S																							T	T
Template Predicted Secondary structure									.	.	.																																											.	.	.
Template SS confidence
		225	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		M	P	E	D	K	V	M	Q	V	S	A	M	A	D	Q	M	L	L	.	.	D	S	K	N	P	Q	S	A	G	N	R	R	I	E	I	M	V	L	T	K
Query Conservation																				.	.
Alig confidence																				.	.
Template Conservation
Template Sequence		N	V	D	A	S	R	L	S	T	Q	G	F	A	W	D	Q	P	I	A	D	N	K	T	K	E	G	R	A	M	N	R	R	V	F	A	T	I	T	G	S
Template Known Secondary structure					G	G	G							T	T	S	S		S	S		T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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