Job Description Q47154 Confidence 99.92% Date Thu Jan 5 12:36:29 GMT 2012 Rank 12 Aligned Residues 107 % Identity 20% Template c1r1mA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein class 4; PDBTitle: structure of the ompa-like domain of rmpm from neisseria2 meningitidis Resolution 1.90 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		R	V	L	I	K	D	D	Q	N	R	N	M	F	E	R	G	S	A	K	I	M	P	F	F	K	T	L	L	V	E	L	A	P	V	F	D	S	L	D	N	.	K	I	I	I	T	G	H	T	D	A	M	A	Y	K	N	N	I	Y	N	N	W	N	L	S	G	D	R	A	L	S	A	R	R	V	L	E	E	A	G
Query Conservation																																										.
Alig confidence									.	.	.																															.												.	.	.
Template Conservation									.	.	.																																											.	.	.
Template Sequence		T	I	S	L	S	A	K	.	.	.	T	L	F	G	F	D	K	D	S	L	R	A	E	A	Q	D	N	L	K	V	L	A	Q	R	L	S	R	T	N	I	Q	S	V	R	V	E	G	H	T	D	F	M	.	.	.	G	S	D	K	Y	N	Q	A	L	S	E	R	R	A	Y	V	V	A	N	N	L	V	S	N	G
Template Known Secondary structure									.	.	.				T	T	S	S	S																		T	T	S													S	S	.	.	.	S																							T	T
Template Predicted Secondary structure									.	.	.																																											.	.	.
Template SS confidence
		74	.	.	.	.	.	80				.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.																					.	.	.	.	.	170	.	.
Predicted Secondary structure																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	E	D	K	V	M	Q	V	S	A	M	A	D	Q	M	L	L	.	.	D	S	K	N	P	Q	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	R	I	E	I	M	V
Query Conservation																				.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.													.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		V	P	V	S	R	.	I	S	A	V	G	L	G	E	S	Q	A	Q	M	T	Q	V	C	E	A	E	V	A	K	L	G	A	K	V	S	K	A	K	K	R	E	A	L	I	A	C	I	E	P	D	R	R	V	D	V	K	I
Template Known Secondary structure				G	G	G	.							T	T	T	T													T			S	S			S	S										T	G	G	G	S
Template Predicted Secondary structure							.
Template SS confidence
		148	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions