Job Description P77529 Confidence 100.00% Date Thu Jan 5 12:30:19 GMT 2012 Rank 1 Aligned Residues 394 % Identity 30% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	K	V	L	V	G	L	V	M	G	V	V	F	G	L	A	L	H	T	I	Y	G	S	D	S	Q	V	L	K	D	S	V	Q	W	F	N	I	V	G	N	G	Y	V	Q	L	L	Q	M	I	V	M	P	L	V	F	A	S	I	L	S	A	V	A	R	L	H	N	A	S	Q	L	G	K	I	S	F	L	T
Query Conservation
Alig confidence																									.	.	.	.	.																																										.
Template Conservation																									.	.	.	.	.																																										.
Template Sequence		V	L	Q	K	I	L	I	G	L	I	L	G	A	I	V	G	L	I	L	G	H	Y	G	.	.	.	.	.	Y	A	H	A	V	H	T	Y	V	K	P	F	G	D	L	F	V	R	L	L	K	M	L	V	M	P	I	V	F	A	S	L	V	V	G	A	A	S	I	S	P	.	A	R	L	G	R	V	G	V	K	I
Template Known Secondary structure				S																		T	T	T	.	.	.	.	.	T					T	T	T	T																									T	T	T		S		T	T	.	T	T
Template Predicted Secondary structure																									.	.	.	.	.																																										.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	T	L	L	F	T	T	L	I	A	A	L	V	G	V	L	V	T	N	L	F	G	L	T	A	E	G	L	V	Q	G	G	A	E	T	A	R	L	N	A	I	E	S	N	Y	V	G	K	V	S	D	L	S	V	P	Q	L	V	L	S	F	I	P	K	N	P	F	A	D	L	T	G	A	N	P	T	S	I	I
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		V	V	Y	Y	L	L	T	S	A	F	A	V	T	L	G	I	I	M	A	R	L	F	N	P	G	A	G	I	H	L	.	.	.	.	.	.	.	.	.	.	A	V	G	G	Q	Q	F	Q	P	H	Q	A	P	P	L	V	H	I	L	L	D	I	V	P	T	N	P	F	G	A	L	A	N	G	Q	.	.	.	V	L
Template Known Secondary structure																							S		S							.	.	.	.	.	.	.	.	.	.																				G	G	G	S		S								S			.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.											.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																							.	.	.	.
Query SS confidence																							.	.	.	.
Query Sequence		S	V	V	I	F	A	A	F	L	G	V	A	A	L	K	L	L	K	D	D	A	.	.	.	.	P	K	G	E	R	V	L	A	A	I	D	T	L	Q	S	W	V	M	K	L	V	R	L	V	M	Q	L	T	P	Y	G	V	L	A	L	M	T	K	V	V	A	G	S	N	L	Q	D	I	I	K	L	G	S	F	V
Query Conservation																							.	.	.	.
Alig confidence																							.	.	.	.
Template Conservation
Template Sequence		P	T	I	F	F	A	I	I	L	G	I	A	I	T	Y	L	M	N	S	E	N	E	K	V	R	K	S	A	E	T	L	L	D	A	I	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I	G	V	F	A	L	I	A	Y	V	M	A	E	Q	G	V	H	V	V	G	E	L	A	K	V	T
Template Known Secondary structure																		T	T		S		T	T																											T	T	S																T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		265	.	.	.	.	270	.	.	.	.		.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		V	A	S	Y	L	G	L	L	I	M	.	F	A	V	H	G	I	L	L	G	I	N	G	V	S	P	L	K	Y	F	R	K	V	W	P	V	L	T	F	A	F	T	S	R	S	S	A	A	S	I	P	L	N	V	E	A	Q	T	R	R	L	G	V	P	E	S	I	A	S	F	A	A	S	F	G	A	T	I	G	Q
Query Conservation												.
Alig confidence												.																																															.
Template Conservation																																																											.
Template Sequence		A	A	V	Y	V	G	L	T	L	Q	I	L	L	V	Y	F	V	L	L	K	I	Y	G	I	D	P	I	S	F	I	K	H	A	K	D	A	M	L	T	A	F	V	T	R	S	S	S	G	T	L	P	V	T	M	R	V	A	.	K	E	M	G	I	S	E	G	I	Y	S	F	T	L	P	L	G	A	T	I	N	M
Template Known Secondary structure															T							T	T	T																							T	G	G	G									.		T	T	T			T	T	T					T	T	T	T	S	S	S
Template Predicted Secondary structure																																																											.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.							.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.
Query Sequence		N	G	C	A	G	L	Y	P	A	M	L	A	V	M	V	A	P	T	V	G	I	N	P	L	D	P	M	W	I	A	T	L	V	G	I	V	T	V	S	S	A	G	V	A	G	V	G	G	G	A	T	F	A	A	L	I	V	L	P	A	M	G	L	P	V	.	.	.	.	.	.	T	L	V	A	L	L	I	S	V
Query Conservation																																																																			.	.	.	.	.	.
Alig confidence						.																		.																																											.	.	.	.	.	.
Template Conservation						.																		.
Template Sequence		D	G	T	A	.	L	Y	Q	G	V	C	T	F	F	I	A	N	A	L	G	S	H	.	L	T	V	G	Q	Q	L	T	I	V	L	T	A	V	L	A	S	I	G	T	A	G	V	P	G	A	G	A	I	M	L	A	M	V	L	H	S	V	G	L	P	L	T	D	P	N	V	A	A	A	Y	A	M	I	L	G	I
Template Known Secondary structure						.															T			.			S	S	T	T													T	T	S	S		T	T														T			T	T	S											G	G	G
Template Predicted Secondary structure						.																		.
Template SS confidence
		312	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	I	D	M	G	R	T	A	L	N	V	S	G	S	M	T	A	G	T	L	T	S	Q	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	I	L	D	M	G	R	T	M	V	N	V	T	G	D	L	T	G	T	A	I	V	A	K	T	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.