Job Description P77529 Confidence 4.52% Date Thu Jan 5 12:30:19 GMT 2012 Rank 40 Aligned Residues 50 % Identity 16% Template c1l6nA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal 283-residue fragment of the hiv-2 1 gag polyprotein Resolution UNK

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		405	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	L	P	V	T	L	V	A	L	L	.	.	I	S	V	E	P	L	I	D	M	G	R	T	A	L	N	V	S	G	S	M	T	A	G	T	L	T	S	Q	W	L	K	Q	T	D	K	A	I	L	D	S
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		A	F	S	P	E	V	I	P	M	F	S	A	L	S	E	G	A	T	P	Q	D	L	N	T	M	L	N	T	V	G	G	H	Q	A	A	M	Q	M	L	K	E	T	I	N	E	E	A	A	E	W	D	R
Template Known Secondary structure		S	S	S	T	T	T								T	T	T															S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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