Job Description P76578 Confidence 99.58% Date Wed Jan 25 15:21:09 GMT 2012 Rank 16 Aligned Residues 213 % Identity 16% Template d2sqca1 SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Terpene synthases Resolution 2.00

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		1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	S	V	D	I	G	I	S	R	L	L	Q	M	Q	R	D	N	G	G	F	A	L	W	D	K	N	G	D	E	E	Y	W	L	T	A	Y	V	M	D	F	L	V	R	A	G	E	Q	G	Y	S	V	P	T	D	A	I	N	R	G	N	E	R	L	L	R	Y	L	Q	D	P	G	M	M	S	I	P	Y	A	D
Query Conservation
Alig confidence																						.	.	.																							.	.	.
Template Conservation																						.	.	.																							.	.	.
Template Sequence		A	R	T	L	D	R	A	V	E	Y	L	L	S	C	Q	K	D	E	G	Y	.	.	.	W	W	G	P	L	I	S	P	V	W	D	T	G	L	A	V	L	A	L	R	A	A	.	.	.	G	L	P	A	D	H	D	R	L	V	K	A	G	E	W	L	L	D	R	Q	I	T	V	P	G	D	W	A	V	K	R	P
Template Known Secondary structure																		T	T	S		.	.	.																						T	.	.	.	T			T	T														T				S			G	G	G	G	T		T
Template Predicted Secondary structure																						.	.	.																							.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		1300	.	.	.	.													.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	K	A	S	.	.	.	.	.	.	.	.	.	.	.	.	K	F	A	V	Q	S	Y	A	A	L	V	L	A	R	Q	Q	K	A	P	L	G	A	L	R	E	I	W	E	H	R	A	D	A	A	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	K	P	G	G	F	A	F	Q	F	D	N	V	Y	Y	P	D	V	C	D	T	A	V	V	V	W	A	L	N	T	L	R	L	P	D	E	R	R	R	R	D	A	M	T	K	G	F	R	W	I	V	G	M	Q	S	S	N	G	G	W	G	A	Y	D	V	D	N	T	S	D	L	P	N	H	I	P	F	S	D
Template Known Secondary structure		T	S					B		S	S	S	S		T	T			B												T	T				S																			T			T	T	S		B		S	S		S	S				S	G	G	G	G	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
															1342	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.			1400	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	L	Q	L	G	V	A	L	K	T	M	G	D	A	T	R	G	E	E	A	I	A	L	A	L	K	T	P	R	N	S	D	E	R	I	W	L	G	D	Y	G	S	S	L	R	D	N	A	L	M	L	S	L	L	E	E	N	.	.	K	L	L	P	D	E	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Template Conservation
Template Sequence		F	G	E	V	T	D	P	P	S	E	D	V	T	A	H	V	L	E	C	F	G	S	F	G	Y	D	D	A	W	K	V	I	R	R	A	V	E	Y	L	K	R	E	Q	K	P	D	G	S	W	F	G	R	W	G	V	N	Y	L	Y	G	T	G	A	V	V	S	A	L	K	A	V	G	I	D	T	R	E	P	Y	I
Template Known Secondary structure		S	S		S	S				B													T	T	T			T	T	S																T	T	S					S	S	B	S	S															T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		1407	.	.	1410	.	.	.	.	.	.	.	.		.	1420	.	.	.																		.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.
Predicted Secondary structure														.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	T	L	L	N	T	L	S	Q	Q	A	F	.	G	E	R	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	Q	E	S	N	A	L	F	L	A	A	R	T	I
Query Conservation														.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	K	A	L	D	W	V	E	Q	H	Q	N	P	D	G	G	W	G	E	D	C	R	S	Y	E	D	P	A	Y	A	G	K	G	A	S	T	P	S	Q	T	A	W	A	L	M	A	L	I	A	G
Template Known Secondary structure											T			T	T	S						G	G	G	G	T		G	G	G	T	T		S	S																T
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions