 |
Job Description | P76578 | Confidence | 84.41% | Date | Wed Jan 25 15:21:09 GMT 2012 |
Rank | 63 | Aligned Residues | 76 |
% Identity | 17% | Template | d2diba1 |
SCOP info | Immunoglobulin-like beta-sandwich
| E set domains
| Filamin repeat (rod domain)
|
Resolution | UNK |
|
 |
  |   |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | T | V | I | L | N | G | L | L | R | D | A | D | G | K | A | L | P | N | Q | P | I | K | L | D | V | I | K | P | D | G | Q | V | L | R | S | V | V | S | Q | P | E | N | G | L | Y | H | F | T | W | P | L | D | S | N | A | A | T | G | M | W | H | I | R | A | N | T | G | D | N | Q | Y | R | M | W | D | F | H | V |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   | . | . |
|   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   | . | . | . |
|   |
|   |
|   |
|   |   |   |
|   |   |
|   |
|
|
|
|   |
|
Template Sequence |   |
E | A | T | T | D | F | T | V | D | S | R | P | L | T | Q | V | . |
. |
G | G | D | H | I | K | A | H | I | A | N | P | S | G | A | S | T | E | C | F | V | T | D | N | A | D | G | T | Y | Q | V | E | Y | T | P | F | E | K | . |
. |
. |
G | L | H | V | V | E | V | T | Y | D | D | V | P | I | P | N | S | P | F | K | V |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |
| S | S | S |
| S | S | . | . |
|
| S |
|
|
|  |  |
|
|
| S | S | S |
|
|
|
|
|  |  |  |  |
| S | S | S |  |  |  |  |  |  |
|
| S | S |
| . | . | . | S |  |  |  |  |  |  | B | S | S | S |
| B |
| T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
480 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
E |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
A |
Template Known Secondary structure |   |
 |
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
114 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|