 |
Job Description | P76578 | Confidence | 95.11% | Date | Wed Jan 25 15:21:09 GMT 2012 |
Rank | 42 | Aligned Residues | 115 |
% Identity | 17% | Template | d2afaa1 |
SCOP info | alpha/alpha toroid
| Six-hairpin glycosidases
| N-acylglucosamine (NAG) epimerase
|
Resolution | 2.15 |
|
 |
  |   |
1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | |
|
|
. | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
R | A | S | V | D | I | G | I | S | R | L | L | Q | M | . |
. |
. |
Q | R | D | N | G | G | F | A | L | W | D | K | N | G | D | E | E | . |
. |
. |
. |
. |
. |
Y | W | L | T | A | Y | V | M | D | F | L | V | R | A | G | E | Q | G | Y | S | V | P | T | D | A | I | N | R | G | N | E | R | L | L | R | Y | L | Q | D | . |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |
|
|   |   |   | . | . | . |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
| . | . | . | . | . | . |   |
|
|
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
Template Sequence |   |
N | R | W | L | E | Q | E | T | D | R | I | F | N | F | G | K | N | A | V | V | P | T | G | F | G | W | L | G | N | K | G | Q | I | K | E | E | X | G | T | H | L | W | I | T | A | R | X | L | H | V | Y | S | V | A | A | S | X | G | R | P | G | A | Y | D | L | V | D | H | G | I | K | A | X | N | G | A | L | R | D | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  | T | T |  |  |
|
| B |
| T | T | S |
| B |
| G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | B |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
  |
  |   |
|
|
1290 | . | . | . | . | . | . | . | . | . | 1300 | |
|
. | . | . | . | . | . | . | . | . | 1310 | . | . | . | . | . | . | . | . | . | 1320 | . | . | . | . | . | . | . | . | . | 1330 | . | . | . | . |
Predicted Secondary structure |   |
. | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
P | G | M | M | S | I | P | Y | A | D | N | . |
. |
L | K | A | S | K | F | A | V | Q | S | Y | A | A | L | V | L | A | R | Q | Q | K | A | P | L | G | A | L | R | E | I | W | E | H | R |
Query Conservation |   |
. | . |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
K | Y | G | G | W | Y | A | C | V | N | D | Q | G | V | V | D | A | S | K | Q | G | Y | Q | H | F | F | A | L | L | G | A | A | S | A | V | T | T | G | H | P | E | A | R | K | L | L | D | Y | T |
Template Known Secondary structure |   |
T | T | S | S | B |
| S |  |  |
| S | S | S |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|