Return to main results Retrieve Phyre Job Id

Job DescriptionP76578
Confidence95.11%DateWed Jan 25 15:21:09 GMT 2012
Rank42Aligned Residues115
% Identity17%Templated2afaa1
SCOP infoalpha/alpha toroid Six-hairpin glycosidases N-acylglucosamine (NAG) epimerase
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1220.........1230... ......1240.........1250 .........1260.........1270.........1280.........
Predicted Secondary structure  ...














......






.
Query SS confidence 













. . .
















. . . . . .






































.
Query Sequence  RASVDIGISRLLQM. . . QRDNGGFALWDKNGDEE. . . . . . YWLTAYVMDFLVRAGEQGYSVPTDAINRGNERLLRYLQD.
Query Conservation     
  
  

   ...
  




 
      
...... 



 
   
  
   
  
           
      .
Alig confidence 













...
















......






































.
Template Conservation     
      

 
        

  

 

       
    


    

 
   
       
  
  

     
 
Template Sequence  NRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEXGTHLWITARXLHVYSVAASXGRPGAYDLVDHGIKAXNGALRDK
Template Known Secondary structure  GGGTT

B
TTS
B
GGG
TT
TTTTTTTB
T
Template Predicted Secondary structure 

























Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   1290.........1300 .........1310.........1320.........1330....
Predicted Secondary structure  ..










..










Query SS confidence  . .










. .

































Query Sequence  . . PGMMSIPYADN. . LKASKFAVQSYAALVLARQQKAPLGALREIWEHR
Query Conservation  .. 
         ..         
     
             
    
Alig confidence  ..










..

































Template Conservation    

        
  
  
  
  

 
 


    

   
   
   
Template Sequence  KYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYT
Template Known Secondary structure  TTSSB
S
SSS

TTT
TT
Template Predicted Secondary structure 













Template SS confidence 
















































   92.......100.........110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions