Job Description P76578 Confidence 99.27% Date Wed Jan 25 15:21:09 GMT 2012 Rank 25 Aligned Residues 213 % Identity 18% Template d1w6ka1 SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Terpene synthases Resolution 2.1

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		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.																					.	1250	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	P	S	L	Y	T	N	A	A	Q	L	Q	A	L	G	I	K	G	D	S	D	E	K	R	R	A	S	V	D	I	G	I	S	R	L	L	Q	M	Q	R	D	N	G	G	F	A	L	W	D	K	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	Y	W	L	T
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		T	A	E	A	L	K	A	V	L	L	L	Q	E	K	C	P	H	V	T	E	H	I	.	.	P	R	E	R	L	C	D	A	V	A	V	L	L	N	M	R	N	P	D	G	G	F	A	T	Y	E	T	K	R	G	G	H	L	L	E	L	L	N	P	S	E	V	F	G	D	I	M	I	D	Y	T	Y	V	E	C	T
Template Known Secondary structure																	T	T			S			.	.														T	T			T	T	S		B		S	S	S				S		G	G	G	G	G	G				S	S		S	S		S	S				B
Template Predicted Secondary structure																								.	.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		1255	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.					.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		A	Y	V	M	D	F	L	V	R	A	G	E	Q	G	Y	S	V	.	.	.	.	P	T	D	A	I	N	R	G	N	E	R	L	L	R	Y	L	Q	D	P	G	M	M	S	I	P	Y	A	D	N	L	K	A	S	K	F	A	V	Q	S	Y	A	A	L	V	L	A	R	Q	Q	K	A	P	L	G	A	L	R	E	I
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	V	M	Q	A	L	K	Y	F	H	K	R	F	P	E	H	R	A	A	E	I	R	E	T	L	T	Q	G	L	E	F	C	R	R	Q	Q	R	A	D	G	S	W	E	G	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	S	S																			S		T	T	S					S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
		1331	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.								.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.											.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		W	E	H	R	A	D	A	A	S	G	L	P	L	L	Q	L	G	V	A	L	K	T	M	G	D	A	.	.	.	.	.	.	.	T	R	G	E	E	A	I	A	L	A	L	K	T	P	R	N	S	D	E	.	.	.	.	.	.	.	.	.	.	R	I	W	L	G	D	Y	G	S	S	L	R	D	N	A	L	M	L
Query Conservation																												.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																						.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	G	V	C	F	T	Y	G	T	W	F	G	L	E	A	F	A	C	M	G	Q	T	Y	R	D	G	T	A	C	A	E	V	S	R	A	C	D	F	L	L	S	R	Q	M	A	D	G	G	W	G	E	D	F	E	S	C	E	E	R	R	Y	V	Q	S	A	Q	S	Q	I	H	N	T	C	W	A	M
Template Known Secondary structure		.	.	.	.	.	B	S	S															T	T				B	T	T	B														T	T			T	T	S				B		T						T	S			B		S	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
		1394	.	.	.	.	.		1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.		.	1420	.	.	.																	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.
Predicted Secondary structure								.																				.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																				.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	L	E	E	N	.	K	L	L	P	D	E	Q	Y	T	L	L	N	T	L	S	Q	Q	A	F	.	G	E	R	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	Q	E	S	N	A	L	F	L	A	A	R	T	I	Q	D	L	P	G	K	W	Q	A
Query Conservation								.																				.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																				.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	L	M	A	V	R	H	P	D	I	E	A	Q	E	R	G	V	R	C	L	L	E	K	Q	L	P	N	G	D	W	P	Q	E	N	I	A	G	V	F	N	K	S	C	A	I	S	Y	T	S	Y	R	N	I	F	P	I	W	A	L	G	R	F	S	Q	L	Y	P	E	R	A	L
Template Known Secondary structure							T	T		S																		T	T	S						S						T	T	T						T	T																		T	T	S	G	G
Template Predicted Secondary structure
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions