Job Description P76578 Confidence 100.00% Date Wed Jan 25 15:21:09 GMT 2012 Rank 11 Aligned Residues 249 % Identity 16% Template d1qqfa_ SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Complement components Resolution 1.45

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		1188	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.				.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		L	E	Q	T	A	S	G	L	F	P	S	L	Y	T	N	A	A	Q	L	Q	A	L	G	I	K	G	.	.	.	D	S	D	E	K	R	R	A	S	V	D	I	G	I	S	R	L	L	Q	M	Q	R	D	N	G	G	F	A	L	W	D	K	N	G	D	E	E	Y	W	L	T	A	Y	V	M	D	F	L	V	R	A
Query Conservation																												.	.	.
Alig confidence																												.	.	.																															.
Template Conservation																																																													.
Template Sequence		G	E	Q	N	M	I	G	M	T	P	T	V	I	A	V	H	Y	L	D	Q	T	E	Q	W	E	K	F	G	L	E	K	R	Q	E	A	L	E	L	I	K	K	G	Y	T	Q	Q	L	A	F	K	Q	P	I	S	A	Y	A	A	F	.	N	N	R	P	P	S	T	W	L	T	A	Y	V	S	R	V	F	S	L	A
Template Known Secondary structure																							T							G	G	G																	T	T	B		T	T	S		B		S	S	.	T	T	S
Template Predicted Secondary structure																																																													.
Template SS confidence
		1011	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.
		1265	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.		.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.											.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.
Predicted Secondary structure																					.																						.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																						.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	Q	G	Y	S	V	P	T	D	A	I	N	R	G	N	E	R	L	.	L	R	Y	L	Q	D	P	G	M	M	S	I	P	Y	A	D	N	L	K	A	S	.	.	.	.	.	.	.	.	.	.	K	F	A	V	Q	S	Y	A	A	L	V	L	A	R	Q	Q	K	A	P	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.																						.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence							.														.																						.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		A	N	L	I	A	.	I	D	S	Q	V	L	C	G	A	V	K	W	L	I	L	E	K	Q	K	P	D	G	V	F	Q	E	D	G	P	V	I	H	Q	E	M	I	G	G	F	R	N	T	K	E	A	D	V	S	L	T	A	F	V	L	I	A	L	Q	E	A	R	D	I	C	E	G	Q	V	N	S	L	P	G	S
Template Known Secondary structure		T	T	T	S		.																		B		T	T	S		B			S	S			S		G	G	G	G	G	G	G	G	S		T	T																					T	T	T		T	T
Template Predicted Secondary structure							.
Template SS confidence
		1090	.	.	.	.		.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
			1324	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	G	A	L	R	E	I	W	E	H	R	A	D	A	A	S	G	L	P	L	L	Q	L	G	V	A	L	K	T	M	G	D	A	T	R	G	E	E	A	I	A	L	A	L	K	T	P	R	N	S	D	E	R	I	W	L	G	D	Y	G	S	S	L	R	D	N	A	L	M	L	S	L	L	E	E	N	K	L	L
Query Conservation		.
Alig confidence		.																																	.	.
Template Conservation																																			.	.
Template Sequence		I	N	K	A	G	E	Y	L	E	A	S	Y	L	N	L	Q	R	P	Y	T	V	A	I	A	G	Y	A	L	A	L	M	N	K	.	.	L	E	E	P	Y	L	T	K	F	L	N	T	A	K	D	R	N	R	W	E	E	P	G	Q	Q	L	Y	N	V	E	A	T	S	Y	A	L	L	A	L	L	L	L	K	D	F
Template Known Secondary structure														T	T																	T	T		.	.			T	T									S	B	T	T	T	B				T	T																			T	T		T
Template Predicted Secondary structure																																			.	.
Template SS confidence
		1169	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.			.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.
		1403	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.		.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		P	D	E	Q	Y	T	L	L	N	T	L	S	Q	Q	A	F	.	G	E	R	W	L	S	T	Q	E	S	N	A	L	F	L	A	A	R	T	I	Q	D	L
Query Conservation																		.
Alig confidence							.											.
Template Conservation							.
Template Sequence		D	S	V	P	P	.	V	V	R	W	L	N	D	E	R	Y	Y	G	G	G	Y	G	S	T	Q	A	T	F	M	V	F	Q	A	L	A	Q	Y	R	A	D
Template Known Secondary structure		T	S				.												T	T	S	T	T
Template Predicted Secondary structure							.
Template SS confidence
		1247	.	.	1250	.		.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions