Job Description P76578 Confidence 100.00% Date Wed Jan 25 15:21:09 GMT 2012 Rank 7 Aligned Residues 267 % Identity 19% Template d1hzfa_ SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Complement components Resolution 2.30

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		1174	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210				.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		A	R	Y	I	K	E	L	K	A	Y	P	Y	G	C	L	E	Q	T	A	S	G	L	F	P	S	L	Y	T	N	A	A	Q	L	Q	A	L	G	.	.	.	I	K	G	D	S	D	E	K	R	R	A	S	V	D	I	G	I	S	R	L	L	Q	M	Q	R	D	N	G	G	F	A	L	W	D	K	N	G	D	E	E
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.																																		.
Template Conservation																																																																											.
Template Sequence		P	G	G	V	A	S	L	L	R	L	P	R	G	C	G	E	Q	T	X	I	Y	L	A	P	T	L	A	A	S	R	Y	L	D	K	T	E	Q	W	S	T	L	P	P	E	T	K	D	H	A	V	D	L	I	Q	K	G	Y	M	R	I	Q	Q	F	R	K	A	D	G	S	Y	A	A	W	.	L	S	R	D	S	S
Template Known Secondary structure							T	T						S	S																					T	T		S	T	T	S		T	T																		T	T	B		T	T	S		B		S	S	.	T	T	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		978	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050		.	.	.	.	.	.
		1251	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.										.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Y	W	L	T	A	Y	V	M	D	F	L	V	R	A	G	E	Q	G	Y	S	V	P	T	D	A	I	N	R	G	N	E	R	L	L	R	Y	L	Q	D	P	G	M	M	S	I	P	Y	A	D	N	L	K	A	S	K	.	.	.	.	.	.	.	.	.	F	A	V	Q	S	Y	A	A	L	V	L	A	R	Q	Q	K
Query Conservation																																																									.	.	.	.	.	.	.	.	.
Alig confidence																					.																																				.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		T	W	L	T	A	F	V	L	K	V	L	S	L	A	Q	E	Q	V	G	.	G	S	P	E	K	L	Q	E	T	S	N	W	L	L	S	Q	Q	Q	A	D	G	S	F	Q	D	P	C	P	V	L	D	R	S	X	Q	G	G	L	V	G	N	D	E	T	V	A	L	T	A	F	V	T	I	A	L	H	H	G	L	A
Template Known Secondary structure																G	G	G	T		.														G	G	G	B		T	T	S		B			S	S			S		G	G	G	G	G	G	G	S	S	T	T																		T
Template Predicted Secondary structure																					.
Template SS confidence
		1057	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.		.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.
		1322	.																	.	.	.	.	.	.	1330	.	.	.		.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.			.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																															.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																															.	.
Query Sequence		A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	L	R	E	I	W	E	H	.	R	A	D	A	A	S	G	L	P	L	L	Q	L	G	V	A	L	K	T	M	G	D	A	T	R	G	E	E	A	I	.	.	A	L	A	L	K	T	P	R	N	S	D	E	R	I	W	L	G	D	Y
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																															.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																															.	.
Template Conservation
Template Sequence		V	F	Q	D	E	G	A	E	P	L	K	Q	R	V	E	A	S	I	S	K	A	S	S	F	L	G	E	K	A	S	A	G	L	L	G	A	H	A	A	A	I	T	A	Y	A	L	T	L	T	K	A	P	A	D	L	R	G	V	A	H	N	N	L	X	A	X	A	Q	E	T	G	D	N	L	Y	W	G	Q	A	P
Template Known Secondary structure		T			T	T	T	T																									T																	T	T															T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		1136	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.
		1383	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.		.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		G	S	S	L	R	D	N	A	L	M	L	S	L	L	E	E	N	K	L	L	P	D	E	Q	Y	T	L	L	N	T	L	S	Q	Q	A	F	.	G	E	R	W	L	S	T	Q	E	S	N	A	L	F	L	A	A	R	T	I	Q	D	L	P
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		A	L	W	I	E	T	T	A	Y	A	L	L	H	L	L	L	H	E	G	K	A	E	X	A	D	Q	A	S	A	W	L	T	R	Q	G	S	F	Q	G	G	F	R	S	T	Q	D	T	V	I	A	L	D	A	L	S	A	Y	W	I	A	S
Template Known Secondary structure																			T		S	S														T	T	S	T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions