Job Description P76578 Confidence 100.00% Date Wed Jan 25 15:21:09 GMT 2012 Rank 9 Aligned Residues 263 % Identity 19% Template d1c3da_ SCOP info alpha/alpha toroid Terpenoid cyclases/Protein prenyltransferases Complement components Resolution 1.80

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		1174	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.				.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		A	R	Y	I	K	E	L	K	A	Y	P	Y	G	C	L	E	Q	T	A	S	G	L	F	P	S	L	Y	T	N	A	A	Q	L	Q	A	L	G	I	K	G	.	.	.	D	S	D	E	K	R	R	A	S	V	D	I	G	I	S	R	L	L	Q	M	Q	R	D	N	G	G	F	A	L	W	D	K	N	G	D	E	E
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.																															.
Template Conservation																																																																											.
Template Sequence		A	E	R	L	K	H	L	I	V	T	P	S	G	A	G	E	Q	N	M	I	G	M	T	P	T	V	I	A	V	H	Y	L	D	E	T	E	Q	W	E	K	F	G	L	E	K	R	Q	G	A	L	E	L	I	K	K	G	Y	T	Q	Q	L	A	F	R	Q	P	S	S	A	F	A	A	F	.	V	K	R	A	P	S
Template Known Secondary structure		G	G	G	G	G	G	G						S	S	T	T																			T	T		S	T	T	T		G	G	G																	T	T	B		T	T	S		B		S	S	.	T	T	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.
		1251	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.		.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.											.	.	.	.	1310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	W	L	T	A	Y	V	M	D	F	L	V	R	A	G	E	Q	G	Y	S	V	P	T	D	A	I	N	R	G	N	E	R	L	.	L	R	Y	L	Q	D	P	G	M	M	S	I	P	Y	A	D	N	L	K	A	S	K	.	.	.	.	.	.	.	.	.	.	F	A	V	Q	S	Y	A	A	L	V	L	A	R	Q
Query Conservation																																			.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																					.														.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																					.
Template Sequence		T	W	L	T	A	Y	V	V	K	V	F	S	L	A	V	N	L	I	A	.	I	D	S	Q	V	L	C	G	A	V	K	W	L	I	L	E	K	Q	K	P	D	G	V	F	Q	E	D	A	P	V	I	H	Q	E	M	I	G	G	L	R	N	N	N	E	K	D	M	A	L	T	A	F	V	L	I	S	L	Q	E	A
Template Known Secondary structure															T	T	T	T	S		.																		B		T	T	S		B			S	S			S		G	G	G	G	G	G	G	G	S		T	T																T
Template Predicted Secondary structure																					.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		1320												.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	K	A	P	L	G	A	L	R	E	I	W	E	H	R	A	D	A	A	S	G	L	P	L	L	Q	L	G	V	A	L	K	T	M	G	D	A	T	R	G	E	E	A	I	A	L	A	L	K	T	P	R	N	S	D	E	R	I	W	L	G	D	Y	G	S	S	L	R	D
Query Conservation			.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																																							.	.
Template Conservation																																																				.	.
Template Sequence		K	D	I	C	E	E	Q	V	N	S	L	P	G	S	I	T	K	A	G	D	F	L	E	A	N	Y	M	N	L	Q	R	S	Y	T	V	A	I	A	G	Y	A	L	A	Q	M	G	R	L	K	G	.	.	P	L	L	N	K	F	L	T	T	A	K	D	K	N	R	W	E	D	P	G	K	Q	L	Y	N	V	E	A
Template Known Secondary structure						T	T	T		T	T																G	G	G																	T	T					.	.										S	B	T	T	T	B				S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		1389	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.		.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		N	A	L	M	L	S	L	L	E	E	N	K	L	L	P	D	E	Q	Y	T	L	L	N	T	L	S	Q	Q	A	F	.	G	E	R	W	L	S	T	Q	E	S	N	A	L	F	L	A	A	R	T	I	Q	D	L
Query Conservation																																.
Alig confidence																		.														.
Template Conservation																		.
Template Sequence		T	S	Y	A	L	L	A	L	L	Q	L	K	D	F	D	F	.	V	P	P	V	V	R	W	L	N	E	Q	R	Y	Y	G	G	G	Y	G	S	T	Q	A	T	F	M	V	F	Q	A	L	A	Q	Y	Q	K	D
Template Known Secondary structure												T	T		T	T	T	.											T	T					S	T	T
Template Predicted Secondary structure																		.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions