Return to main results Retrieve Phyre Job Id

Job DescriptionP76578
Confidence56.54%DateWed Jan 25 15:21:09 GMT 2012
Rank107Aligned Residues93
% Identity16%Templatec3pmmA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative cytoplasmic protein; PDBTitle: the crystal structure of a possible member of gh105 family from2 klebsiella pneumoniae subsp. pneumoniae mgh 78578
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1196...1200.........1210.... .....1220.........1230.........1240.........1250... ......1260.........1270
Predicted Secondary structure 





.















....



Query SS confidence 


















.






































. . . .
















Query Sequence  FPSLYTNAAQLQALGIKGD. SDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWL. . . . TAYVMDFLVRAGEQGYS
Query Conservation   
       
         .        
  
  

   
  




 
      
 

....

 
   
  
   
  
Alig confidence 


















.

























..










....















.
Template Conservation 
   

   
    

     
  
          
   

 



.. 





 

 











  

  
 .
Template Sequence  WLTXVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDSGLW. . HTLLDDPHSYLEASATAGFAYGILKAVRKRY.
Template Known Secondary structure 


TT


TTS
..SBTT
TTS
TTS.
Template Predicted Secondary structure 













..











.
Template SS confidence 















































































   234.....240.........250.........260.........270......... 280.........290.........300.........310
 
   1271... .....1280.........1290.
Predicted Secondary structure 

...


Query SS confidence 



. . .
















Query Sequence  VPTD. . . AINRGNERLLRYLQDPG
Query Conservation 
   ...        
       
Alig confidence 



...
















Template Conservation 
   
   
 

  

   
  

Template Sequence  VGQHYAGVAEKAIRGIVQNISPQG
Template Known Secondary structure  S
GGGTB
TTS
Template Predicted Secondary structure 






Template SS confidence 























   311........320.........330....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions