Job Description P76578 Confidence 43.08% Date Wed Jan 25 15:21:09 GMT 2012 Rank 123 Aligned Residues 85 % Identity 14% Template c3osvC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:flagellar basal-body rod modification protein flgd; PDBTitle: the crytsal structure of flgd from p. aeruginosa Resolution 2.35 Å

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		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.					.	.	.
Predicted Secondary structure																																																						.																					.	.	.	.
Query SS confidence																																																						.																					.	.	.	.
Query Sequence		S	K	Q	F	F	M	F	G	P	R	D	L	Y	R	P	G	E	T	V	I	L	N	G	L	L	R	D	A	D	G	K	A	L	P	N	Q	P	I	K	L	D	V	I	K	P	D	G	Q	V	L	R	S	.	V	V	S	Q	P	E	N	G	L	Y	H	F	T	W	P	L	D	S	N	A	.	.	.	.	A	T	G
Query Conservation																																																						.																					.	.	.	.
Alig confidence																											.	.	.	.	.	.																						.																					.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		G	R	K	V	I	V	A	T	D	K	S	V	V	D	T	K	D	T	F	K	A	S	L	N	L	.	.	.	.	.	.	P	V	S	S	S	N	V	W	V	N	V	Y	D	D	K	G	T	V	V	N	R	I	N	L	G	Q	Q	A	A	G	S	V	S	F	M	W	D	G	K	D	S	S	G	N	I	M	P	P	G
Template Known Secondary structure		T								S						T	T	S									.	.	.	.	.	.	S	S												T	T	S													S									S	B		T	T			B			S
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	W	H	I	R	A	N	T	G	D	N	Q	Y	R	M	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	K	F	E	A	Q	T	S	I	D	G	K	T	Y	G
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions