Job Description P76578 Confidence 99.97% Date Wed Jan 25 15:21:09 GMT 2012 Rank 13 Aligned Residues 213 % Identity 14% Template c3hs0B_ PDB info PDB header:immune system Chain: B: PDB Molecule:cobra venom factor; PDBTitle: cobra venom factor (cvf) in complex with human factor b Resolution 3.00 Å

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		952	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.						.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.		.	.	.	1010	.	.		.	.	.	.	.	.	.	1020	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																																			.							.
Query SS confidence																							.	.	.	.	.																																			.							.
Query Sequence		D	E	L	K	R	G	G	K	P	P	V	N	H	V	N	I	V	V	Q	Q	A	.	.	.	.	.	L	P	V	T	L	N	E	Q	G	E	G	S	V	T	L	P	I	G	D	F	N	G	E	L	R	V	M	A	Q	A	W	T	A	D	.	D	F	G	S	N	E	.	S	K	V	I	V	A	A	P	V	I	A	E
Query Conservation																							.	.	.	.	.																																			.							.
Alig confidence																							.	.	.	.	.																																			.							.
Template Conservation
Template Sequence		G	F	I	A	D	S	D	I	I	S	R	S	D	F	P	K	S	W	L	W	L	T	K	D	L	T	E	E	P	N	S	Q	G	I	S	S	K	T	M	S	F	Y	L	R	D	S	I	T	T	W	V	V	L	A	V	S	F	T	P	T	K	G	I	C	V	A	E	P	Y	E	I	R	V	M	K	V	F	F	I	D
Template Known Secondary structure			S			G	G	G				B					S	S										S				T	T	S												S			S											T	T	T															S
Template Predicted Secondary structure
Template SS confidence
		716	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.
		1025	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.					.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		L	N	M	P	R	F	M	A	S	G	D	T	S	R	L	T	L	D	I	T	N	L	T	D	K	P	Q	K	L	N	V	A	L	T	A	S	G	L	L	E	L	V	S	D	S	P	A	.	.	.	.	A	V	E	L	A	P	G	V	R	T	T	L	F	I	P	V	R	A	L	P	G	Y	G	D	G	E	I	Q	A
Query Conservation																																																	.	.	.	.
Alig confidence																																																	.	.	.	.																					.
Template Conservation																																																																									.
Template Sequence		L	Q	M	P	Y	S	V	V	K	N	E	Q	V	E	I	R	A	I	L	H	N	Y	V	N	E	D	I	Y	V	R	V	E	L	L	Y	N	P	A	F	C	S	A	S	T	K	G	Q	R	Y	R	Q	Q	F	P	I	K	A	L	S	S	R	A	V	P	F	V	I	V	P	L	E	.	Q	G	L	H	D	V	E	I
Template Known Secondary structure						S				T	T													S	S	S												T	T			S	S			S	S	S										S	S													S	.	S
Template Predicted Secondary structure																																																																									.
Template SS confidence
		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.		.	.	.	870	.	.	.	.
		1101	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.								1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.		1160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.																					.
Query SS confidence																																									.	.	.	.	.	.	.																					.
Query Sequence		T	I	S	G	L	A	L	P	G	E	T	V	A	D	Q	H	K	Q	W	K	I	G	V	R	P	A	F	P	A	Q	T	V	N	Y	G	T	A	L	Q	.	.	.	.	.	.	.	P	G	E	T	W	A	I	P	A	D	G	L	Q	N	F	S	P	V	T	L	.	E	G	Q	L	L	L	S	G	K	P
Query Conservation																																									.	.	.	.	.	.	.																					.
Alig confidence						.	.	.	.																																.	.	.	.	.	.	.																					.
Template Conservation						.	.	.	.
Template Sequence		K	A	S	V	.	.	.	.	Q	E	A	L	W	S	D	G	V	R	K	K	L	K	V	V	P	E	G	V	Q	K	S	I	V	T	I	V	K	L	D	P	R	A	K	G	V	G	G	T	Q	L	E	V	I	K	A	R	K	L	D	D	R	V	P	D	T	E	I	E	T	K	I	I	I	Q	G	D	P
Template Known Secondary structure						.	.	.	.	T	T	S	S														S	S																		S	S	S												T	T			T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		875	.	.	.					.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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