Job Description P76578 Confidence 97.04% Date Wed Jan 25 15:21:09 GMT 2012 Rank 36 Aligned Residues 210 % Identity 10% Template c3draB_ PDB info PDB header:transferase Chain: B: PDB Molecule:geranylgeranyltransferase type i beta subunit; PDBTitle: candida albicans protein geranylgeranyltransferase-i2 complexed with ggpp Resolution 1.80 Å

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		1178	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.								.	.	1250
Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.
Query Sequence		K	E	L	K	A	Y	P	Y	G	C	L	E	Q	T	A	S	G	L	F	P	S	L	Y	T	N	A	A	Q	L	Q	A	L	G	I	K	G	D	S	D	E	K	R	R	A	S	V	D	I	G	I	S	R	L	L	Q	M	Q	R	D	N	G	G	F	A	L	W	D	K	N	G	.	.	.	.	.	.	.	D	E	E
Query Conservation																																																																								.	.	.	.	.	.	.
Alig confidence																																												.																												.	.	.	.	.	.	.
Template Conservation																																												.
Template Sequence		R	C	L	I	G	L	P	S	T	A	Q	S	E	D	S	N	K	L	A	I	I	Y	F	C	L	H	G	L	Q	L	I	Q	K	F	Q	F	T	N	Q	E	L	I	.	Y	Y	R	N	F	I	I	N	Q	F	M	I	E	N	N	Q	I	I	S	F	R	S	T	H	Y	F	Q	K	T	N	Q	K	Y	D	C	P	N
Template Known Secondary structure									G	G	G	G	G	G	T	T																T	T											.															S	S						S	S	G	G	G	G	G	S		T	T	T	S			B
Template Predicted Secondary structure																																												.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		1251	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270		.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.												.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	W	L	T	A	Y	V	M	D	F	L	V	R	A	G	E	Q	G	Y	S	.	V	P	T	D	A	I	N	R	G	N	E	R	L	L	R	Y	L	Q	D	P	G	M	M	S	.	.	.	.	.	.	.	.	.	.	.	I	P	Y	A	D	N	L	K	A	S	K	F	A	V	Q	S	Y	A	A	L	V	L	A	R
Query Conservation																						.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.				.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.
Template Sequence		L	S	S	T	L	F	A	L	Y	N	L	L	I	L	K	S	P	Y	H	T	I	I	N	R	.	.	.	K	K	I	M	N	F	L	C	K	C	Q	V	K	D	G	I	N	K	G	G	F	V	P	T	L	Y	Y	N	E	E	N	G	D	Y	K	Q	Y	G	E	P	D	L	R	V	C	Y	M	A	L	L	I	R	H
Template Known Secondary structure															T	T			G	G	G	T				.	.	.											B			S	S	T	T	T	T		B		S						T	T	T	T						S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		1319	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	K	A	P	L	G	A	L	R	E	I	W	E	H	R	A	D	A	A	S	G	L	P	L	L	Q	L	G	V	A	L	K	T	M	G	D	A	T	R	G	E	E	A	I	A	L	A	L	K	T	P	R	N	S	D	E	R	I	W	L	G	D	Y	G	S	S	L	R	D	N	A	L	M	L	S	L	L	E	E
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	M	K	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	I	D	L	I	S	L	Q	Q	F	I	L	D	R	I	N	I	N	G	G	F	S	S	T	I	M	D	E	S	H	L	G	F	T	F	C	A	I	A	S	L	K	L
Template Known Secondary structure			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	B		T	T	S		B		S	S	T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.																																.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		1399	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.																		1420	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	K	L	L	P	D	E	Q	Y	T	L	L	N	T	L	S	Q	Q	A	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	W
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	Y	P	L	E	K	L	K	S	T	K	E	W	L	I	H	R	Q	V	D	Y	P	E	N	L	Y	P	N	Y	E	Y	Y	R	N	I	D	I	G	G	F
Template Known Secondary structure		T	T			G	G	G										T	T	B					T	T	T					T	T			G	G	G	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions