Job Description P76578 Confidence 91.70% Date Wed Jan 25 15:21:09 GMT 2012 Rank 46 Aligned Residues 265 % Identity 12% Template c1wlhA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:gelation factor; PDBTitle: molecular structure of the rod domain of dictyostelium2 filamin Resolution 2.80 Å

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.			.	.	.	.	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		G	E	T	V	I	L	N	G	L	L	R	D	A	D	G	K	A	L	P	N	Q	P	I	K	L	D	V	I	K	P	D	G	Q	V	L	R	S	V	V	S	Q	P	E	N	G	L	Y	H	F	T	W	P	L	D	S	N	A	A	T	G	M	W	H	I	R	A	N	T	G	D	N	Q	Y	.	.	R	M	W	D	F
Query Conservation																																																																											.	.
Alig confidence																						.																.	.																			.	.	.															.	.
Template Conservation																						.																.	.																			.	.	.
Template Sequence		F	Q	P	S	K	F	K	I	H	A	V	D	P	D	G	V	D	G	G	D	.	G	F	V	V	T	I	E	G	P	A	P	V	D	P	V	.	.	M	V	D	N	G	D	G	T	Y	D	V	E	F	E	P	K	E	A	.	.	.	G	D	Y	V	I	N	L	T	L	D	G	D	N	V	N	G	F	P	K	T	V
Template Known Secondary structure		T	S										S	S	S							.								S	S	S					B	.	.					S	S	S										S		.	.	.	S									S	S	S	B		T	T		S
Template Predicted Secondary structure																						.																.	.																			.	.	.
Template SS confidence
		567	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.		.	.	.	590	.	.	.	.	.	.	.	.	.	600	.			.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.				620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	D	F	M	P	E	R	M	A	L	N	L	T	G	E	K	T	P	L	T	P	K	D	E	V	K	F	S	V	V	G	Y	Y	L	Y	G	A	P	A	N	G	N	T	L	Q	G	Q	L	F	L	R	P	L	R	E	A	V	S	A	L	P	G	F	E	F	G	D	I	A	A	E	N	L	S	R	T	L	D
Query Conservation
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	K	P	A	P	S	A	E	H	S	Y	A	E	G	E	G	L	V	K	V	F	D	N	A	P	A	E	F	T	I	F	A	V	D	T	K	G	V	A	R	T	D	G	G	D	P	F	E	V	A	I	N	G	P	D	G	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							B		T	T	T					S	G	G	G	T				S	S	S									B	B	S	S	S	S	B		S	S												T	T	S		B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Q	L	T	L	D	D	K	G	R	G	E	V	S	T	E	S	Q	W	K	E	T	H	S	P	L	Q	V	I	F	Q	G	S	L	L	E	S	G	G	R	P	V	T	R	R	A	E	Q	A	I	W	P	A	D	A	L	P	G	I	R	P	Q	F	A	S	K	S	V	Y	D	Y	R	T	D	S	T	V	K	Q
Query Conservation
Alig confidence																								.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	K	V	T	D	N	N	D	G	T	Y	G	V	V	Y	D	A	P	V	E	G	.	.	.	.	.	.	.	N	Y	N	V	N	V	T	L	R	G	N	P	I	K	N	M	P	I	D	V	K	C	I	E	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Template Known Secondary structure									T	T	T										S	S		.	.	.	.	.	.	.									T	T				T	T		S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.								.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.																									.
		638	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		P	I	V	D	E	G	S	N	A	A	F	D	I	V	Y	S	D	A	Q	G	V	K	K	A	V	S	G	L	Q	V	R	L	I	R	E	R	R	D	Y	Y	W	N	W	S	E	D	E	G	W	Q	S	Q	F	D	Q	K	D	L	I	E	N	E	Q	T	L	D	L	K	A	D	E	T	G	K	V	S	F	.	P	V
Query Conservation																																																																															.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	D	S	S	F	G	S	F	T	F	T	V	A	A	K	N	K	K	G	E	V	K	T	Y	G	G	D	K	F	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	T	G	P	A	E	E	I	T	L	D	A	I	D	N	Q	D	G	T	Y	T	A	A	Y	S	L	V
Template Known Secondary structure		G	G	G													B		T	T	S	S	B		S	S			S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			S										S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.																					.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	W	G	A	Y	R	L	E	V	K	A	P	N	E	A	V	S	S	V	R	F	W	A	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	G	R	F	S	T	G	V	K	L	N	G	K	H	I	E	G	S	P	F	K	Q	V	L
Template Known Secondary structure			S										T	T				T	T		S
Template Predicted Secondary structure
Template SS confidence
		813	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions