Job Description P76578 Confidence 65.09% Date Wed Jan 25 15:21:09 GMT 2012 Rank 97 Aligned Residues 155 % Identity 13% Template c1qfhB_ PDB info PDB header:actin binding protein Chain: B: PDB Molecule:protein (gelation factor); PDBTitle: dimerization of gelation factor from dictyostelium2 discoideum: crystal structure of rod domains 5 and 6 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.			.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		G	E	T	V	I	L	N	G	L	L	R	D	A	D	G	K	A	L	.	.	P	N	Q	P	I	K	L	D	V	I	K	P	D	G	Q	V	L	R	S	V	V	S	Q	P	E	N	G	L	Y	H	F	T	W	P	L	D	S	N	A	A	T	G	M	W	H	I	R	A	N	T	G	D	N	Q	Y	R	M	W	D	F
Query Conservation																				.	.
Alig confidence																				.	.																																							.	.	.
Template Conservation																																																												.	.	.
Template Sequence		N	A	P	A	E	F	T	I	F	A	V	D	T	K	G	V	A	R	T	D	G	G	D	P	F	E	V	A	I	N	G	P	D	G	L	V	V	D	A	K	V	T	D	N	N	D	G	T	Y	G	V	V	Y	D	A	P	V	E	.	.	.	G	N	Y	N	V	N	V	T	L	R	G	N	P	I	K	N	M	P	I
Template Known Secondary structure		T	S									B	B	T	T	S		B			S												G	G	G											S	S	S										S	S	.	.	.										T	T				B	T		S
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.				.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	D	F	M	P	E	R	M	A	L	N	L	T	G	E	K	T	P	L	T	P	K	D	E	V	K	F	S	V	V	G	Y	Y	L	Y	G	A	P	A	N	G	N	T	L	Q	G	Q	L	F	L	R	P	L	R	E	A	V	S	A	L	P	G	F	E	F	G	D	I	A	A	E	N	L	S	R	T	L	D
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	K	C	I	.	.	.	.	.	.	.	.	.	E	G	A	N	G	E	D	S	S	F	G	S	F	T	F	T	V	A	A	K	N	K	K	G	E	V	K	T	Y	G	G	D	K	F	E	V	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	A	E	E	I
Template Known Secondary structure							.	.	.	.	.	.	.	.	.					G	G	G													B		T	T	S		B		S	S			S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		744	.	.	.	.										.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.																						.	.	790	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	Q	L	T	L	D	D	K	G	R	G	E	V	S	T	E	S	Q	W	K	E	T	H	S	P	L	Q	V	I	F	Q	G	S	L
Query Conservation
Alig confidence																							.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		T	L	D	A	I	D	N	Q	D	G	T	Y	T	A	A	Y	S	L	V	G	N	.	.	.	.	.	G	R	F	S	T	G	V	K	L
Template Known Secondary structure									S	S	S										S	S	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		794	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.						.	.	.	.	.	820	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions