Job Description P76578 Confidence 88.77% Date Wed Jan 25 15:21:09 GMT 2012 Rank 53 Aligned Residues 143 % Identity 9% Template c1kv3F_ PDB info PDB header:transferase Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: human tissue transglutaminase in gdp bound form Resolution 2.80 Å

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		1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.								.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		P	V	I	A	E	L	N	M	P	R	F	M	A	S	G	D	T	S	R	L	T	L	D	I	T	N	L	T	D	K	P	Q	K	L	N	V	A	L	T	A	S	G	.	.	.	.	.	.	.	L	L	E	L	V	S	D	S	P	A	A	V	E	L	A	P	G	V	R	T	T	L	F	I	P	V	R	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.																												.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		G	M	A	M	R	I	R	V	G	Q	S	M	N	M	G	S	D	F	D	V	F	A	H	I	T	N	N	T	A	E	E	Y	V	C	R	L	L	L	C	A	R	T	V	S	Y	N	G	I	L	G	P	E	C	G	T	K	Y	L	L	N	L	T	L	E	P	F	S	E	K	S	V	P	L	C	I	L	Y	E	K	Y
Template Known Secondary structure		S									S			B	T	T													S	S	S															T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		1089	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	P	G	Y	G	D	G	E	I	Q	A	T	I	S	G	L	A	L	P	G	E	T	V	A	D	Q	H	K	Q	W	K	I	G	V	R	P	A	F	P	A	Q	T	V	N	Y	G	T	A	L	Q	P	G	E	T	W	A	I	P	A	D	G	L	Q	N	F	S	P	V	T	L	E	G	Q	L	L
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		R	D	C	L	T	E	S	N	L	I	K	V	R	A	L	L	V	E	P	V	I	N	S	.	.	Y	L	L	A	E	R	D	L	Y	L	E	N	P	E	I	K	I	R	I	L	G	E	P	K	Q	K	R	K	L	V	A	E	V	S	L	Q	N	P	L	P	V	A	L	E	G	C	T	F	T	V	E
Template Known Secondary structure		T	T	T			T	T												T	T	T	T		.	.											B										S			B	S	S	S												S	S	S		B		S
Template Predicted Secondary structure																									.	.
Template SS confidence
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.			.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions