Job Description P76578 Confidence 49.21% Date Wed Jan 25 15:21:09 GMT 2012 Rank 112 Aligned Residues 176 % Identity 10% Template c1f00I_ PDB info PDB header:cell adhesion Chain: I: PDB Molecule:intimin; PDBTitle: crystal structure of c-terminal 282-residue fragment of2 enteropathogenic e. coli intimin Resolution 1.90 Å

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		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		P	A	T	L	F	T	L	S	D	I	G	V	S	A	H	R	Y	H	N	R	L	D	I	F	T	Q	S	L	E	N	G	A	A	Q	Q	G	I	E	V	S	L	L	N	E	K	G	Q	T	L	.	T	Q	A	T	S	D	A	Q	G	H	V	Q	L	E	N	D	K	N	A	A	L	L	L	A	R	K	D	G	Q	T
Query Conservation																																																			.
Alig confidence																	.																																		.																					.	.	.	.	.
Template Conservation																	.																																																							.	.	.	.	.
Template Sequence		S	I	T	E	I	K	A	D	K	T	T	A	V	A	N	.	G	Q	D	A	I	T	Y	T	V	K	V	M	K	G	D	K	P	V	S	N	Q	E	V	T	F	T	T	T	L	G	K	L	S	N	S	T	E	K	T	D	T	N	G	Y	A	K	V	T	L	T	S	T	T	P	.	.	.	.	.	G	K	S	L	V
Template Known Secondary structure									S		S				S	S	.	S													T	T				T	T								S	S	S			S		S						T	T	S									S	S		.	.	.	.	.
Template Predicted Secondary structure																	.																																																							.	.	.	.	.
Template SS confidence
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.		.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.						.	.	730	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	D	L	K	L	P	A	L	D	L	A	E	F	N	I	A	G	A	P	G	Y	S	K	Q	F	F	M	F	G	P	R	D	L	Y	R	P	G	E	T	V	I	L	N	G	L	L	R	D	A	D	G	K	A	L	P	N	Q	P	I	K	L	D	V	I	K	P	D	G	Q	V	L	R	S	V	V	S	Q	P
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		S	A	R	V	S	D	V	A	V	D	V	K	A	P	E	V	E	F	F	T	T	L	T	I	D	D	G	N	I	E	I	V	G	T	G	V	K	G	K	L	P	T	V	W	L	Q	Y	G	Q	V	N	L	K	A	S	G	G	N	G	K	Y	T	W	R	S	A	N	P	A	.	.	.	.	.	.	I	A	S	V	D
Template Known Secondary structure						T	T																				T	T					T	T	T					S			S				T	T									S	T	T	S							S		T	T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.							.	.	.	.	.
			442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	E	N	G	L	Y	H	F	T	W	P	L	D	S	N	A	A	T	G	M	W	H	I	R	A	N	T	G	D	N	Q	Y	R	M	W	D	F
Query Conservation		.
Alig confidence		.											.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		A	S	S	G	Q	V	T	L	K	E	K	.	.	.	.	.	.	.	G	T	T	T	I	S	V	I	S	S	D	N	Q	T	A	T	Y	T	I
Template Known Secondary structure		T	T	T							S	S	.	.	.	.	.	.	.	S									T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		807	.	.	810	.	.	.	.	.	.	.								.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions