Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8C1
Confidence97.68%DateThu Jan 5 11:07:24 GMT 2012
Rank5Aligned Residues81
% Identity19%Templatec2y1bA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:putative outer membrane protein, signal; PDBTitle: crystal structure of the e. coli outer membrane lipoprotein2 rcsf
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 
















Query SS confidence 















































































Query Sequence  QFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGID
Query Conservation 




  
 
  
 
 

 
 
  
 
     
  
 
    

    

  
  

  
  

   
  









Alig confidence 











.
















..







...................




















Template Conservation   
  



    .   

 
 
 


    ..   

   ...................

  

  

  





   
Template Sequence  IYTNAEELVGKP. FRDLGEVSGDSCQASNQ. . DSPPSIPT. . . . . . . . . . . . . . . . . . . ARKRMQINASKMKANAVLLHS
Template Known Secondary structure 

GGGGTT

.
STT..S



...................TT
S
Template Predicted Secondary structure 





.




..




...................



Template SS confidence 















































































   51........60.. .......70......... 80....... ..90.........100........
 
   82.......90.........100.....
Predicted Secondary structure 




Query SS confidence 























Query Sequence  IDYETVGQNGSMLMVSVSGTAVKT
Query Conservation   
            
 
 



 
Alig confidence 










.











Template Conservation 
        
 .    
 
 
  
Template Sequence  CEVTSGTPGCY. RQAVCIGSALNI
Template Known Secondary structure  S

TT
S.
Template Predicted Secondary structure 






.
Template SS confidence 























   109110......... 120.........130.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions