Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABF6
Confidence99.98%DateThu Jan 5 11:15:23 GMT 2012
Rank14Aligned Residues112
% Identity21%Templated2z3ga1
SCOP infoCytidine deaminase-like Cytidine deaminase-like Cytidine deaminase
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60.........70.........80.........90.........100.........110.........120......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITVNY
Query Conservation       

  
   
   

 


 
 



 
  

 

 
 




   

 





 

  
   

  
  


  
Alig confidence 
















































....


























Template Conservation 

     

  
          
 
 





  

 
  
 



   ....
 



 

  
   
   
  
  
 
Template Sequence  LSQEESTLIERATATINSIPISEDYSVASAALSSDGRIFTGVNVYHFTG. . . . GPCAELVVLGTAAAAAAGNLTCIVAIG
Template Known Secondary structure 

S


SSS
TTS




TTT....


TT


Template Predicted Secondary structure 


















....





Template SS confidence 















































































   3......10.........20.........30.........40.........50. ........60.........70........
 
   127..130.........140.........150... ......160..
Predicted Secondary structure  .......











..




Query SS confidence  . . . . . . .


























. .








Query Sequence  . . . . . . . TPCGHCRQFMNELNSGLDLRIHLPGRE. . AHALRDYLP
Query Conservation  ....... 


 


 
 
        
      ..   
 



Alig confidence  .......


























..








Template Conservation          


 


 
 

  
  
      
      
 



Template Sequence  NENRGILSPCGRCRQVLLDLHPGIKAIVKDSDGQPTAVGIRELLP
Template Known Secondary structure  TTTT



TT

TTS
GGGGS
Template Predicted Secondary structure 




















Template SS confidence 












































   7980.........90.........100.........110.........120...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions