Job Description P0ABF6 Confidence 100.00% Date Thu Jan 5 11:15:23 GMT 2012 Rank 8 Aligned Residues 115 % Identity 34% Template c3ijfX_ PDB info PDB header:hydrolase Chain: X: PDB Molecule:cytidine deaminase; PDBTitle: crystal structure of cytidine deaminase from mycobacterium2 tuberculosis Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		D	E	D	A	L	A	F	A	L	L	P	L	A	A	A	C	A	R	T	P	L	S	N	F	N	V	G	A	I	A	R	G	V	S	G	T	W	Y	F	G	A	N	M	E	F	I	G	A	T	M	Q	Q	T	V	H	A	E	Q	S	A	I	S	H	A	W	L	S	G	E	K	A	L	A	A	I	T	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																				.	.																										.	.	.
Template Conservation																																																				.	.
Template Sequence		V	D	W	N	M	L	R	G	N	A	T	Q	A	A	A	G	A	Y	V	P	Y	S	R	F	A	V	G	A	A	A	L	V	D	D	G	R	V	V	T	G	C	N	V	E	N	V	S	Y	G	L	.	.	T	L	C	A	E	C	A	V	V	C	A	L	H	S	T	G	G	G	R	L	L	A	L	A	C	V	D	G
Template Known Secondary structure																T	T		B		T	T	T											T	T	S								B			S	S	G	G	G	.	.		B													T	T												T
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
					125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	N	Y	T	P	C	G	H	C	R	Q	F	M	N	E	L	N	S	G	L	D	L	R	I	H	L	P	G	R	E	A	H	A	L	R	D	Y	L	P	D	A	F	G
Query Conservation		.	.	.
Alig confidence		.	.	.																							.	.
Template Conservation																											.	.
Template Sequence		H	G	S	V	L	M	P	C	G	R	C	R	Q	V	L	L	E	H	G	G	S	E	L	L	I	.	.	D	H	P	V	R	P	R	R	L	G	D	L	L	P	D	A	F	G
Template Known Secondary structure		T			B																	T	T				.	.			T	T	T	T							S		S		S
Template Predicted Secondary structure																											.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions