Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFA7
Confidence11.07%DateThu Jan 5 11:25:45 GMT 2012
Rank4Aligned Residues91
% Identity20%Templated1ppjc1
SCOP infoa domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   117..120......... 130.........140.........150.........160.........170.........180.........190....
Predicted Secondary structure 


..

























Query SS confidence 












. .
































































Query Sequence  FTRLLLSIRSKML. . LSLSFCVAAAFLSAFLDALTVVAVVISVAVGFYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQ
Query Conservation 
  

   

   ..
 
     

 

  





 


 

   
                                 
Alig confidence 












..

















.......................................







Template Conservation   









 


     

  
  

    .......................................    
   
Template Sequence  AYAILRSIPNKLGGVLALAFSILILALIPLLHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SKQRSMMF
Template Known Secondary structure  T
SSGGGT

.......................................
SSSSSTT
Template Predicted Secondary structure 


.......................................





Template SS confidence 















































































   277..280.........290.........300......... 310.......
 
   195....200.........210.........220.........230.........240......
Predicted Secondary structure 








Query SS confidence 



















































Query Sequence  FRGFLRSLMMHAGVGTALGGVMTMVGEPQNLIIAKAAGWHFGDFFLRMSPVT
Query Conservation                
  


  
 

 
 
  
       
  
     
  
Alig confidence 



















































Template Conservation 

     
   
  

 




    
 
    


 
  

  


 


 
Template Sequence  RPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTA
Template Known Secondary structure 
TS
S
TTT
Template Predicted Secondary structure 





Template SS confidence 



















































   318.320.........330.........340.........350.........360.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions