Job Description P0AFA7 Confidence 3.89% Date Thu Jan 5 11:25:45 GMT 2012 Rank 29 Aligned Residues 82 % Identity 16% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																	.	.	.																		.
Query SS confidence																																	.	.	.																		.
Query Sequence		V	V	L	E	Q	F	R	G	F	L	R	S	L	M	M	H	A	G	V	G	T	A	L	G	G	V	M	T	M	V	G	.	.	.	E	P	Q	N	L	I	I	A	K	A	A	G	W	H	F	G	D	.	F	F	L	R	M	S	P	V	T	V	P	V	L	I	C	G	L	L	T	C	L	L	V	E	K	L	R	W
Query Conservation																																	.	.	.																		.
Alig confidence																																	.	.	.																		.								.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.
Template Sequence		D	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	A	R	S	F	A	P	A	I	L	T	R	N	F	T	N	H	W	V	Y	W	V	G	P	.	.	.	.	.	.	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L
Template Known Secondary structure			T	T	S		S																																									T			T	T	T	T							.	.	.	.	.	.													T	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	Y	G	E	T	L	P	E	K	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	R	L	K	S	V	S	E	R	L	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions