Job Description P0AFA7 Confidence 1.83% Date Thu Jan 5 11:25:45 GMT 2012 Rank 88 Aligned Residues 176 % Identity 8% Template c1oy8A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acriflavine resistance protein b; PDBTitle: structural basis of multiple drug binding capacity of the acrb2 multidrug efflux pump Resolution 3.63 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	F	C	V	A	A	A	F	L	S	A	F	L	D	A	L	T	V	V	A	V	V	I	S	V	A	V	G	F	Y	G	I	Y	H	R	V	A	S	S	R	T	E	D	T	D	L	Q	D	D	S	H	I	D	K	H	Y	K	V	V	L	E	Q	F	R	G	F	L	R	S	L	M	M	H	A	G	V	G	T
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L
Template Known Secondary structure													T			S																											.	.	.	.	.	.	.	.	.	.	.	.	.							T				S							T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.														.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	G	G	V	M	T	M	V	G	E	P	Q	N	L	I	I	A	K	A	A	G	W	H	F	G	D	F	F	L	R	M	S	P	V	T	V	P	V	L	I	C	G	L	L	T	C	L	L	V	E	K	L	R	W	F	G	Y	G	E	T	L	P	E	K	V	R	E	V	L	Q	Q	F	D	D	Q	S	R	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T	M	L	K	F	G	W	F	N	R	M	F	E	K	S	T	H	H	Y	T	D	S	V	G	G	I	L	R
Template Known Secondary structure									T	T	T	S	T	T	T	T				G	G	G																						T	T	T									S															T
Template Predicted Secondary structure
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	R	Q	D	K	I	R	L	I	V	Q	A	I	I	G	V	W	L	V	T	A	L	A	L	H	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	G	R	Y	L	V	L	Y	L	I	I	V	V	G	M	A	Y	L	F	V	R	L	P	S	S	F	L	P
Template Known Secondary structure																							S	S		B		S	S
Template Predicted Secondary structure
Template SS confidence
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions