 |
Job Description | P45465 | Confidence | 10.72% | Date | Thu Jan 5 12:02:42 GMT 2012 |
Rank | 52 | Aligned Residues | 68 |
% Identity | 9% | Template | d1xdfa1 |
SCOP info | TBP-like
| Bet v1-like
| Pathogenesis-related protein 10 (PR10)-like
|
Resolution | 1.90 |
|
 |
  |   |
36 | . | . | . | 40 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | F | I | A | A | N | . |
. |
. |
. |
. |
V | N | E | R | G | G | E | I | D | L | I | M | R | . |
E | G | R | T | T | I | F | V | E | V | R | Y | R | R | S | A | L | Y | G | G | A | A | A | S | V | T | R | . |
. |
S | K | Q | H | K | L | L | Q | T | A | R | L | W | L | A | R | H | N | G | S | F | D |
Query Conservation |   |
|   |
|
|   |
|
| . | . | . | . | . |   |
|   |   |   |
|
|
|
|
|
|
|   | . |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|
|
|   |   | . | . |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
| . |
|   |   |   |
Template Sequence |   |
Y | S | I | V | G | G | V | G | L | P | D | T | I | E | K | I | S | F | E | T | K | L | V | E | G | A | N | G | G | S | I | G | K | V | T | I | K | I | E | T | K | G | D | A | Q | P | N | E | E | E | G | K | A | A | K | A | R | G | D | A | F | F | K | A | I | E | N | Y | L | S | A | H | . |
P | E | Y | N |
Template Known Secondary structure |   |
 |  |  |  | S | S | T | T | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  | T | S | . | G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
. | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|