Return to main results Retrieve Phyre Job Id

Job DescriptionP45465
Confidence32.49%DateThu Jan 5 12:02:42 GMT 2012
Rank20Aligned Residues64
% Identity20%Templatec3se7A_
PDB info PDB header:ligaseChain: A: PDB Molecule:vana; PDBTitle: ancient vana
Resolution3.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40.........50.........60.........70...... ...80..... ....90..
Predicted Secondary structure 



















......

.
Query SS confidence 























































. . . . . .








.






Query Sequence  DAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGRTTIFVEVRYRRSALYGGA. . . . . . AASVTRSKQ. HKLLQTA
Query Conservation    

  
   
   

 

 

 
   






     








     
  ...... 


   
 . 

   
Alig confidence 
















........






























......








.






Template Conservation        
 

   

  ........
   

     

    







    
         
     

  

  
Template Sequence  SLVQDTAKAVYRALGCR. . . . . . . . GLSRVDLFLTEDGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRADVIDRLVSLA
Template Known Secondary structure  T

........
TTS
SS


STT
TT

Template Predicted Secondary structure 



........


















Template SS confidence 














































































   267..270.........280... ......290.........300.........310.........320.........330.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions