Job Description P45465 Confidence 17.57% Date Thu Jan 5 12:02:42 GMT 2012 Rank 29 Aligned Residues 47 % Identity 13% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	W	E	A	Q	A	R	R	W	L	E	G	K	G	L	R	F	I	A	A	N	V	N	E	R	G	G	E	I	D	L	I	M	R	E	G	R	T	T	I	F	V	E	V	R	Y	R	R	S	A	L	Y	G	G
Query Conservation
Alig confidence																	.	.	.	.	.	.	.			.
Template Conservation																	.	.	.	.	.	.	.			.
Template Sequence		A	N	L	Q	A	L	V	L	K	A	W	T	T	L	G	.	.	.	.	.	.	.	C	K	.	G	W	G	R	I	D	V	M	L	D	S	D	G	Q	F	Y	L	L	E	A	N	T	S	P	G	M	T	S	H	S
Template Known Secondary structure																T	.	.	.	.	.	.	.			.	S										T	T	S									S	S				S	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.			.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.								250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions