Job Description P0A7I0 Confidence 20.11% Date Thu Jan 5 11:05:42 GMT 2012 Rank 50 Aligned Residues 93 % Identity 14% Template d2foka1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Restriction endonuclease FokI, N-terminal (recognition) domain Resolution 2.30

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.
Predicted Secondary structure																											.	.																																																			.
Query SS confidence																											.	.																																																			.
Query Sequence		Y	A	Q	L	S	D	V	S	R	C	F	T	D	W	Q	Q	V	Q	E	D	I	E	T	A	Q	.	.	M	M	L	D	D	P	E	M	R	E	M	A	Q	D	E	L	R	E	A	K	E	K	S	E	Q	L	E	Q	Q	L	Q	V	L	L	L	P	K	D	P	D	D	E	R	N	A	F	L	E	V	R	.	A	G
Query Conservation																											.	.																																																			.
Alig confidence																											.	.																												.	.	.	.	.	.								.										.
Template Conservation																																																								.	.	.	.	.	.								.
Template Sequence		F	E	N	L	K	R	V	V	Q	V	F	D	R	N	S	K	V	H	N	E	V	K	N	I	K	I	P	T	L	V	K	E	S	K	I	Q	K	E	L	V	A	I	M	N	Q	H	D	L	I	Y	T	Y	K	E	.	.	.	.	.	.	L	V	G	T	G	T	A	.	P	C	D	A	I	I	Q	A	T	I	A	D
Template Known Secondary structure										T	T	S		T	T	S									T								S													S	S	S								.	.	.	.	.	.								.				S						S
Template Predicted Secondary structure																																																								.	.	.	.	.	.								.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	D	E	A	A	L	F	A	G	D	L	F	R	M	Y	S	R	Y	A	E	A	R	R	W
Query Conservation
Alig confidence														.	.	.
Template Conservation														.	.	.
Template Sequence		Q	G	K	G	Y	I	D	N	W	S	S	D	.	.	.	G	F	L	R	W	A	H	A	L	G	F
Template Known Secondary structure						S								.	.	.									T	T	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions