Job Description P0A7I0 Confidence 10.16% Date Thu Jan 5 11:05:42 GMT 2012 Rank 100 Aligned Residues 61 % Identity 20% Template c2hkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1 Resolution 2.80 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	D	E	R	N	A	F	L	E	V	R	A	G	T	G	G	D	E	A	A	L	F	A	G	D	L	F	R	M	Y	S	R	Y	A	E	A	R	R	W	R	V	E	I	M	S	A	S	E	G	E	H	G	G	Y	K	E	I	I	A	K	I	S	G	D	G	V	Y	G	R	L	K	F	E	S	G	G	H	R	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template Sequence		P	T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	L	A	A	A	R	Q	L	Q	.	.	.	.	.	.	.	.	.	.	.	S	F	G	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A	T	F	R	K	.	.	.	.	.	.	.	.	G	N	Y	V	A	D	L	G	A	M	V	V
Template Known Secondary structure			S	S		S									B												.	.	.	.	.	.	.	.	.	.	.		T	T								S	S	S	S	S	B	S	S							.	.	.	.	.	.	.	.	T	T					S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.												.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions