Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAY1
Confidence20.16%DateThu Jan 5 11:14:06 GMT 2012
Rank3Aligned Residues27
% Identity22%Templatec3iz5K_
PDB info PDB header:ribosomeChain: K: PDB Molecule:60s ribosomal protein l13a (l13p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100...
Predicted Secondary structure 







Query SS confidence 






























Query Sequence  HHAEEALATAAVCLMSGHHDCPTVITVNADK
Query Conservation    
 
 

 












  
 

  
Alig confidence 


















....







Template Conservation   






 


 



 
....







Template Sequence  HMLGRLASIVAKELLNGQR. . . . VVVVRCEE
Template Known Secondary structure  BBTT

....
GGG
Template Predicted Secondary structure 



....

Template SS confidence 






























   1920.........30....... ..40.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions