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Job DescriptionP0AF96
Confidence23.51%DateThu Jan 5 11:25:39 GMT 2012
Rank17Aligned Residues83
% Identity16%Templatec3kgzA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: crystal structure of a cupin 2 conserved barrel domain protein from2 rhodopseudomonas palustris
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  KHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGAPDTDWLADKDIAFLPEGVDEKTVILN
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Template Sequence  QLLFADPNLACEWRYFEVDEGGYSTLERH. AHVHAVMIHRGHGQCLVGE. . . . . . . . . . . . . . . . . . . . . . . . . TISDVA
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   50.........60.........70........ .80.........90....... ..100...
 
   116...120.........130.........140....
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Query Sequence  EGDFVVFYPGEVHKPLCAVGAPAQVRKAV
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Template Sequence  QGDLVFIPPMTWHQFRANRGDCLGFLCVV
Template Known Secondary structure  TT

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   104.....110.........120.........130..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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