Job Description P0AF96 Confidence 7.59% Date Thu Jan 5 11:25:39 GMT 2012 Rank 41 Aligned Residues 64 % Identity 19% Template c2pfwB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution Resolution 1.90 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	I	S	E	D	M	T	E	P	Y	E	A	R	R	A	E	Y	H	A	R	Y	L	D	I	Q	I	V	L	K	G	Q	E	G	M	T	F	S	T	Q	P	A	G	A	P	D	T	D	W	L	A	D	K	D	I	A	F	L	P	E	G	V	D	E	K	T	V	I	L	N	E	G	D	F	V	V	F	Y	P	G
Query Conservation
Alig confidence																					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	X	A	V	K	I	W	F	D	K	G	A	E	G	Y	V	H	A	H	.	R	H	S	Q	V	S	Y	V	V	E	G	E	F	H	V	N	V	D	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	V	L	T	A	G	D	S	F	F	V	P	P	H
Template Known Secondary structure											T	T									.	S	S																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T							T	T
Template Predicted Secondary structure																					.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	H	K	P	L	C	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	H	G	A	V	C	P	T	G
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions