Job Description P77522 Confidence 100.00% Date Thu Jan 5 12:30:15 GMT 2012 Rank 1 Aligned Residues 393 % Identity 20% Template d1vh4a_ SCOP info Single-stranded right-handed beta-helix Stabilizer of iron transporter SufD Stabilizer of iron transporter SufD Resolution 1.75

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		53	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.
Query Sequence		P	E	W	M	L	E	F	.	.	.	.	.	.	.	R	L	N	A	Y	R	A	W	L	E	M	E	E	P	H	W	L	K	A	H	Y	D	K	L	N	Y	Q	D	Y	S	Y	Y	S	A	P	S	C	G	N	C	D	D	T	C	A	S	E	P	G	A	V	Q	Q	T	G	A	N	A	F	L	S	K	E	V	E	A
Query Conservation									.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	W	H	H	L	F	E	A	K	R	S	P	Q	A	Q	Q	H	L	Q	Q	L	L	R	T	G	L	P	T	R	K	H	E	N	W	K	Y	T	P	L	E	G	L	I	N	S	Q	F	V	S	I	A	G	E	I	S	P	Q	Q	R	D	A	L	A	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																															T	T	S	T	T		T	T								T	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	E	Q	L	G	V	P	V	R	E	G	K	E	V	A	V	D	A	I	F	D	S	V	S	V	A	T	T	Y	R	E	K	L	A	E	Q	G	I	I	F	C	S	F	G	E	A	I	H	D	H	P	E	L	V	R	K	Y	L	G	T	V	V	P	G	N	D	N	F	F	A	A	L	N	A	A	V	A	S	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	D	S	V	R	L	V	F	V	D	G	R	Y	V	P	A	L	S	D	A	T	E	G	.	.	.	.	.	.	S	G	Y	E	V	S	I	N	D	D	R	Q	G	L	P	D	.	.	.	.	.	.	.	.	.	.	A	I	Q	A	E	V	F	L	H	L	T	E	S	L	A	Q	S
Template Known Secondary structure		.	.	.	.	.	.	.	.			S							T	T				G	G	G	S				T	T	.	.	.	.	.	.	S	S							S			T	T				.	.	.	.	.	.	.	.	.	.		S	S													S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		G	T	F	I	Y	V	P	K	G	V	R	C	P	M	E	L	S	T	Y	F	R	I	N	A	.	.	.	.	E	K	T	G	Q	F	E	R	T	I	L	V	A	D	E	D	S	Y	V	S	Y	I	E	G	C	S	A	P	V	R	D	S	Y	Q	L	H	A	A	V	V	E	V	I	I	H	K	N	A	E	V	K	Y
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																												.
Template Conservation																																																									.
Template Sequence		V	T	H	I	A	V	K	R	G	Q	R	P	A	K	P	L	L	L	M	H	I	T	Q	G	V	A	G	E	E	V	N	T	A	H	Y	R	H	H	L	D	L	A	E	G	A	E	A	T	V	I	E	H	F	V	S	.	L	N	D	A	R	H	F	T	G	A	R	F	T	I	N	V	A	A	N	A	H	L	Q	H
Template Known Secondary structure									T	T				S	S												S	S	S															T	T												.	S	S	S	S														T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	V	Q	N	W	F	P	G	D	N	N	T	G	G	I	L	N	F	V	T	K	R	A	L	C	E	G	E	N	S	K	M	S	W	T	Q	S	E	T	G	S	A	I	T	W	K	Y	P	S	C	I	L	R	G	D	N	S	I	G	E	F	Y	S	V	A	L	T	S	G	H	Q	Q	A	D	T	G	T	K	M
Query Conservation
Alig confidence																			.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		I	K	L	A	F	E	N	P	L	S	H	H	F	A	H	N	D	.	.	.	.	.	.	.	L	L	L	A	E	D	A	T	A	F	S	H	S	F	L	L	G	G	A	V	L	R	H	N	T	S	T	Q	L	N	G	E	N	S	T	L	R	I	N	S	L	A	M	P	V	K	N	E	V	C	D	T	R	T	W	L
Template Known Secondary structure									T	T									.	.	.	.	.	.	.					T	T													S												S	T	T													T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.								.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	I	G	K	N	T	K	S	T	I	I	S	K	G	I	S	A	G	H	S	Q	N	S	Y	R	G	L	V	K	I	M	P	T	A	T	N	A	R	N	F	T	Q	C	D	S	M	L	I	G	A	N	C	G	A	H	T	F	P	Y	V	E	C	R	N	N	S	A	Q	L	E	H	E	A	T	T	S	R	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	N	K	G	F	C	N	S	R	Q	L	H	K	T	I	V	S	D	K	G	R	A	V	F	N	G	L	I	N	V	A	Q	H	A	I	K	T	D	G	Q	M	T	N	N	N	L	L	M	G	K	L	A	E	V	D	T	K	P	Q	L	E	I	Y	A	D	D	V	K	C	S	H	G	A	T	V	G	R	I	D
Template Known Secondary structure					S	S	S													T	T													T	T		T	T													S	T	T														S	S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	Q	L	F	Y	C	L	Q	R	G	I	S	E	E	D	A	I	S	M	I	V	N	G	F	C	K	D	V	F	S	E	L	P	L	E	F	A	V	E	A	Q	K	L	L	A	I	S	L	E	H	S	V
Query Conservation
Alig confidence																																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		D	E	Q	I	F	Y	L	R	S	R	G	I	N	Q	Q	D	A	Q	Q	M	I	I	Y	A	F	A	A	E	L	T	E	A	L	R	D	E	G	.	.	.	L	K	Q	Q	V	L	A	R	I	G	Q	R	L
Template Known Secondary structure											T	T																				T	T						.	.	.											T	T	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.