Job Description P75757 Confidence 7.33% Date Thu Jan 5 12:13:49 GMT 2012 Rank 56 Aligned Residues 91 % Identity 8% Template c3aynA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rhodopsin; PDBTitle: crystal structure of squid isorhodopsin Resolution 2.70 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	M	A	I	A	V	A	G	L	L	A	N	I	L	S	F	W	L	L	H	H	G	S	E	E	K	N	L	N	V	R	A	A	A	L	H	V	L	G	D	L	L	G	S	V	G	A	I	I	A	A	L	I	I	I	W	T	G	W	T	P	A	D	P	I	L	S	I	L	V	S	L	L	V	L	R	S	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	G	I	C	G	I	I	G	C	G	G	N	G	I	V	I	Y	L	F	T	K	T	K	S	L	Q	T	P	A	N	M	F	I	I	N	L	A	F	S	D	F	T	F	S	L	V	N	G	F	P	L	M	T	I	S	C	F	L	K	K	W	I	F	G	F	A	A	C	K	V	Y	G	F	I	G	G	I	F	G
Template Known Secondary structure																									S	T	T			T	T																			S	T	T								T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	K	D	S	V	N	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	M	S	I	M	T	M	A	M	I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions